Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91262g00002 ATGGAGGAACATAGCAAGAATTCAATTGTTGCCTTACCTTCATCATCAACCAAATGGAGACTCCTTAGAAAAACTTGTGCAACTAGAATATTCTCAACTCAACAACTTGACTCCACACAGATCCTAAGGAAGAGAAAGGATTTTGTCCATTACCATGATAATGATGAGAAGTTTAAAGTGTTTAAGGATATAGTTGTTGGCTTGACTGAAGAATCTTCAAGGTCTTGTTTGGGAGATTTTTTTCCTTTGTTAGGATCTTTTGGTGCACGTGGTGCACGTGCAAGGACAAAGGATCGTTATGCAAAGTTGTACGCAGTTTTTGATGGTGCCATAGAAGAGAGAATTGGATCGAGGGATTCAAAAACATATTCTAGTGATTGCAACGATGTGTTGGATTCTCTTTTGGACCTTGTCAATGAAGAGAGTTCTGAATTGAATCGCTATGATGTTTTGCATTTATTGATCGATTTATTTATTGCTGCAATAGACACAACATCAAGCACATTAGAATGGGCAATGGCAGAGTTGATACATAGTCCAACAACATTGCATAAACTTAAAGAAGAACTTCAACATTCACTTGGCAAAAATGGAGAAGTTGAAGAATCTCATATCTCAAAACTCCCATACCTTAATGCAGTTGTGAAAGAAACTTTGAGGCTTCATCCACCAGGACCAATGCTCATTCCCCACAAAGCAAATGATGATGTGGAGCTAGCTGGTTTCTCTGTGCCCAAAAATGCACAAGTCTTAATTAATGTGTGGTCAATTGGAAAAGACTCAAACATTTGGACTAATCCTAATTTATTTGAACCTGAGAGGTTCTTGAATAGTGAAATTGATTTTAAGGGTAAACATTTTGAGCTTATTCCATTTGGGTCTGGAAGAAGAATTTGCCCTGGATTACCATTGGCTACAAGGAGTTTGAGTTTTATGTTGGCATCACTTTTATATCAATTCAATTGGAAGGTTGCTAATGGGACGAATCCAGAAGATATAGATATGAGTTTCAGTTATGGCCTTAACATACATAAGGCACAACCTTTACTTCTTGTACCTATCAAAGTTTAG 1071 0.3716 MEEHSKNSIVALPSSSTKWRLLRKTCATRIFSTQQLDSTQILRKRKDFVHYHDNDEKFKVFKDIVVGLTEESSRSCLGDFFPLLGSFGARGARARTKDRYAKLYAVFDGAIEERIGSRDSKTYSSDCNDVLDSLLDLVNEESSELNRYDVLHLLIDLFIAAIDTTSSTLEWAMAELIHSPTTLHKLKEELQHSLGKNGEVEESHISKLPYLNAVVKETLRLHPPGPMLIPHKANDDVELAGFSVPKNAQVLINVWSIGKDSNIWTNPNLFEPERFLNSEIDFKGKHFELIPFGSGRRICPGLPLATRSLSFMLASLLYQFNWKVANGTNPEDIDMSFSYGLNIHKAQPLLLVPIKV 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91262g00002 356 Gene3D Cytochrome P450 2 350 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91262g00002 356 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 46 355 - -
Stsc91262g00002 356 SUPERFAMILY Cytochrome P450 15 353 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91262g00002 356 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 292 301 IPR017972 GO:0005506|GO:0016705
Stsc91262g00002 356 PRINTS P450 superfamily signature 160 177 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91262g00002 356 PRINTS P450 superfamily signature 213 224 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91262g00002 356 PRINTS P450 superfamily signature 299 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91262g00002 356 PRINTS P450 superfamily signature 290 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91262g00002 356 PRINTS E-class P450 group I signature 149 166 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91262g00002 356 PRINTS E-class P450 group I signature 169 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91262g00002 356 PRINTS E-class P450 group I signature 289 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91262g00002 356 PRINTS E-class P450 group I signature 212 230 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91262g00002 356 PRINTS E-class P450 group I signature 253 277 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91262g00002 356 PRINTS E-class P450 group I signature 299 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91262g00002 356 Pfam Cytochrome P450 54 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91262g00002 356 FunFam Geraniol 8-hydroxylase 100 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91262g00002 Stsc-Chr91262 10646 12327 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91262g00002 4 355 Cytochrome P450 AT2G45570 44.924 4.49e-118 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91262g00002 - K20556 gmx:100809483 382.104