Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91259g00006 ATGAATGAATCCAACTTCCACGTTGTTGACAAGGAAAAAATGGTACAATCATCACAATATGAAAGATTCTCAAAGGATTTTGTAATGGGAGGGGTAGCAGCAATCATATCGAAGACTGCGGCGGCACCAATTGAGAGAGTGAAACTTTTATTGCAAAACCAAGCTGAAATGATTAAAAGAGGGCAACTCAAGAAACCATACTTGGGTGTATGTGATGGATTTAAGAGGGTGTTTGCGGAAGAGGGCGTCATTGCCTTTTGGAGAGGACACCAGGCCAATGTCATTCGATACTTCCCTACACAGGCTTTCAATTTTGCATTCAAAGGTTACTTCAAAAGCATTTTTGGACAATCCAAAGAGAGAGACGGGTACATTAAGTGGTTTGCTGGAAATGTGGCTTCAGGAAGTGCTGCGGGAGCAACTACTTCGCTGCTTCTTTATCATTTAGATTATGCACGAACACGATTGGGCACCGATGCATTGGAGTGCCGTGCTACCGGTCAGCGCCAGTTTAAGGGACTAGTTGATGTATACCGTAAAACCTGGTTAAGTGATGGAGTTGTTGGCTTGTACAGGGGATTCGGGGTGTCAATAGTGGGAATCACCATGTATCGAGGGATGTACTTCGGGCTCTATGACACCATGAAGCCTATCATTTTAGTTGGGCCTTTTGAGGGCAACTTCTTTGCTAGTTTCTTCTTAGGTTGGAGCATTACTACATCTGCGNNNNNNNNNNACCCGTTTGATACACTGCGCCGGAGAATGATGCTAACATCTGGACAACCAAACAAGTATTACAACGCAAGGCATGCATTTCGTGAGATTGTTCGTCAAGAGGGTTTGTTAGCTCTATTTCGAGGTGTTACTGCAAATATGCTTCTTGGTGTTGCAGGAGCCGGGGTGCTTGCTGGATATGATCAGCTCAGCCGCTTCTCGTCTAGACACTATCACGACAATGAAACGAACGAGAAAGTTTTGAAATGA 984 0.44 MNESNFHVVDKEKMVQSSQYERFSKDFVMGGVAAIISKTAAAPIERVKLLLQNQAEMIKRGQLKKPYLGVCDGFKRVFAEEGVIAFWRGHQANVIRYFPTQAFNFAFKGYFKSIFGQSKERDGYIKWFAGNVASGSAAGATTSLLLYHLDYARTRLGTDALECRATGQRQFKGLVDVYRKTWLSDGVVGLYRGFGVSIVGITMYRGMYFGLYDTMKPIILVGPFEGNFFASFFLGWSITTSAXXXXPFDTLRRRMMLTSGQPNKYYNARHAFREIVRQEGLLALFRGVTANMLLGVAGAGVLAGYDQLSRFSSRHYHDNETNEKVLK 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91259g00006 327 SUPERFAMILY Mitochondrial carrier 21 308 IPR023395 -
Stsc91259g00006 327 PRINTS Mitochondrial carrier protein signature 191 209 IPR002067 GO:0055085
Stsc91259g00006 327 PRINTS Mitochondrial carrier protein signature 39 53 IPR002067 GO:0055085
Stsc91259g00006 327 PRINTS Mitochondrial carrier protein signature 141 159 IPR002067 GO:0055085
Stsc91259g00006 327 PRINTS Mitochondrial carrier protein signature 89 109 IPR002067 GO:0055085
Stsc91259g00006 327 PRINTS Mitochondrial carrier protein signature 26 39 IPR002067 GO:0055085
Stsc91259g00006 327 PRINTS Mitochondrial carrier protein signature 234 256 IPR002067 GO:0055085
Stsc91259g00006 327 PRINTS Adenine nucleotide translocator signature 231 247 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc91259g00006 327 PRINTS Adenine nucleotide translocator signature 23 35 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc91259g00006 327 PRINTS Adenine nucleotide translocator signature 67 88 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc91259g00006 327 PRINTS Adenine nucleotide translocator signature 100 112 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc91259g00006 327 PRINTS Adenine nucleotide translocator signature 126 139 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc91259g00006 327 Gene3D Mitochondrial carrier domain 24 317 IPR023395 -
Stsc91259g00006 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 21 114 IPR018108 -
Stsc91259g00006 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 226 311 IPR018108 -
Stsc91259g00006 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 126 218 IPR018108 -
Stsc91259g00006 327 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 17 315 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc91259g00006 327 Pfam Mitochondrial carrier protein 127 219 IPR018108 -
Stsc91259g00006 327 Pfam Mitochondrial carrier protein 22 117 IPR018108 -
Stsc91259g00006 327 Pfam Mitochondrial carrier protein 229 312 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91259g00006 Stsc-Chr91259 25721 28573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91259g00006 14 316 Antiporters AT5G17400 74.342 6.06e-162 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91259g00006 K05863 - gmx:100776735 521.931