Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91256g00002 ATGTTACCTTCACCTGTTGCCCAGATGGGTGGAGTACGTGGGTTGCCTACTCAAGTCCGTGGATATGGTCCACAGGATGTTCGTATGGATGATAGGCATGAGGCTAGGATCCTATCAGTTCCACTGAGTCAAAGACTTGGTGATGATTCAATTACCTTGGGACCCCAAGGGGGTCTTGCTAGAGGAATGTCGATGAGAGGCTCAACTGCAGTTTCAAGTTCAGGTAGTCTTAATGGTTATAGTAATTTACCGGAGGGCTCACCATATAGTTCTAGGGAGGACCTGGCACCAAGATATATTCCAGATAGATTTGCTGCTCCTGCTGCTTATGATCAACCCAGTGCTAAAGAGAGAAGTATGAATTATGGTAACAGTGATATGAGAAATGCAGATAGGAATTTTGACAGACCTGTTGCAACTTCACCTTCTTCTCAATTGCAAGGGACAACAGTCTCCCAGAGTCCTCCTTCAGAAAGTATTTGGTCAGAAGAACGATTGCGAGACATGTCAATGGCAGCAATAAGAGAATATTATAGTGCTAGGGATGAGAAGGAAGTTGTTTTGTGTGTTAAAGATTTGAACTCTCCAAGCTTCCATCCTTCCATGGTATCTATTTGGGTCACAGACTCTTTCGAGAGAAAGGACACAGAGAGAGATCTTCTGGCTCAGCTATTAGTAAACCTTGTGAAGTCTCAGGATGGTACCTTGAGTCAAGCCCAGCTCATCAAAGGGTTTGAATCTGTTCTTAGTACTTTGGAAGATGCGGTTAACGATGCCCCAAAAGCACCAGAGTTTCTTGGCCGCATTTTTGCCAAAGCTATAACAGAGCATGTAATCTCTTTAAATGAGATTGGGCAGTTAATACATGAGGGTGGTGAGGAACCTGGCAGTCTCTTAGAAGCGGGACTTGCGGCTGATGTTCTTGGAAGTACCTTGGAGGTCATACAAACGGAAAAAGGCGATGCTGTTTTAAGTGAGATCCGGGGAAGCTCAAATTTGCGGTTGGAGACTTTCCGGCCGCCGGAACCATTGAAATGGAGGAAGTTAGAGAACTTTGTTTAG 1062 0.4482 MLPSPVAQMGGVRGLPTQVRGYGPQDVRMDDRHEARILSVPLSQRLGDDSITLGPQGGLARGMSMRGSTAVSSSGSLNGYSNLPEGSPYSSREDLAPRYIPDRFAAPAAYDQPSAKERSMNYGNSDMRNADRNFDRPVATSPSSQLQGTTVSQSPPSESIWSEERLRDMSMAAIREYYSARDEKEVVLCVKDLNSPSFHPSMVSIWVTDSFERKDTERDLLAQLLVNLVKSQDGTLSQAQLIKGFESVLSTLEDAVNDAPKAPEFLGRIFAKAITEHVISLNEIGQLIHEGGEEPGSLLEAGLAADVLGSTLEVIQTEKGDAVLSEIRGSSNLRLETFRPPEPLKWRKLENFV 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91256g00002 353 SMART ma3_7 166 280 IPR003891 -
Stsc91256g00002 353 FunFam Eukaryotic translation initiation factor 4G 159 352 - -
Stsc91256g00002 353 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 37 352 IPR045208 GO:0003743
Stsc91256g00002 353 MobiDBLite consensus disorder prediction 57 94 - -
Stsc91256g00002 353 MobiDBLite consensus disorder prediction 66 88 - -
Stsc91256g00002 353 Pfam MA3 domain 170 279 IPR003891 -
Stsc91256g00002 353 MobiDBLite consensus disorder prediction 106 159 - -
Stsc91256g00002 353 Gene3D - 159 353 - -
Stsc91256g00002 353 MobiDBLite consensus disorder prediction 1 25 - -
Stsc91256g00002 353 ProSiteProfiles MI domain profile. 165 289 IPR003891 -
Stsc91256g00002 353 MobiDBLite consensus disorder prediction 136 159 - -
Stsc91256g00002 353 SUPERFAMILY ARM repeat 161 348 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91256g00002 1 353 Eukaryotic Initiation Factors Gene Family AT3G60240 49.462 5.39e-99 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91256g00002 K03260 - gmx:100796636 514.998