Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91256g00001 ATGAAGCATTCATCTCCTGTGAATGAGGTGGCTGTTTCAGTTGTGTCTAATAATGAGGAAAAGGGGAAGGAATCTCTCAGTAGGTCAAATTCTTTGAAAGATACTAGTAAGGTACAGAAGGAAGGCCAACTTCAACATCTGGTTGCTGTACAGTCTCCTACTGTGGCAAATGTGCCATCCCAAGATGTTAAGAGATCTACTGGGGGTTCTGAAACTGTAGCATCGAAAACAAACTATTCTGCAGCTGTTACCAGTGAAGTTGTCACAGCAACTACTGAAGACACAATATCAACCCCCTCTTTGAGTGTGCCTCATTCTGAAGCAAAAAGTAACGGTGCTGCAGAACTTTCTGGTTCTGTTTCAGCTGATGGACCTGCTGCTCAAGCTGTGGATAGTTTGAAAGCAAATGATGAGCCAGATGAATTTTCACAACTAGATAAACTGTCAAAGAATAAAGATTCAGAAATGGGTGAAAAAACTGAAATTTCATCTATTCAAGGATGTAAACAAGAGGTGGATGAATCTACAGGCTGTCCTCCGGAATATGTAAACCAAAGCTCTACTGCACTGGGTTCTTCTACAGACGTTTGTTTGAGTAGAGATGATATTGCAGTTGGTAGTGAAGCTGTTTCTGCAAGTTCTGGAACATTAGACCAGTCTTCTGATATTCTAGAAACAACAACAGAATGTTGCGGTGATGGTTCAGAGAATGCTGGCAGTGTAGTTTCTCTTCCAGCACCAGATACTAATGATACACCAATTCTAGATCAAAATAAGGTGAAAACTACATCCAAGGGGAAAAAGAAAAGAAAAGAGATTCTTCAGAAAGCAGATGCTGCTGGGTCAACCTCTGATCTTTATAATGCATACAAGGGACCTGAGGAAAAGAAAGATGCTGTTGTAAGTGCAGAGAAAGAGGAAAGCGTTTCTACTTCTGGAAGTTTAGAGCTGTCTTCTACTGGTGCTGCTCAGCCAGATTGCATAACAAGTGAGCTATGTGGACAAAGTAAAGCTGAGCTTGATGATTGGGAGGATGCTGCTGACATGTCTACACCAAAACTTGAATTTTCAGGTCAAACTGAACAGGTTACGGACAGTTGTACAGTTACAGTGAAAAGGTACTCTCGAGATTTCCTTTTGAAGTTTGCAGAGCAGTGCACAAATCTTCCTGAAGGATTTGAAATCACGGCAGACATAGCTGAGTCTTTGATGGGTGCCAATATTAATAGTTCACGTGATCCACATCCTTCTCCTGGAAGGATTATAGATAGGCCTAGTGGGATGTCTCGGATGGATCGGCGTGGAGGTGCTATTACTGAGGAAGACAAATGGAGCAAAGTTTCCAATTCTTTTCATTCAGGTATGCGTTTGGATGGTATTGGAGGTAATGCAGGATTTCACCCAATTCAAGGAGGCAATTTTGGTGTTTTAAGGAATCCTCGCTCACCTTTGCCATATGCCGGAGCTGGAGGGATTCTTTCTGGGCCAATGCAATCCATGGGAAATCTGGGAGGAATGCCAAGAAACAGTTCTGACAGTGAAAGATGGCAGCGTGCGTCTAGCTTCCAGCAGAGGGGTTTAATTCCTTCTCCCCAAAGTCCGTTGCAGATGATGCACAAGGCTGATAAGAAGTATGAGGTCGGTAAAGTGACAGATGCGGAAGAGGCCAAGCAGAGGCAATTGAAAGCTATATTGAATAAGTTAACTCCCCAGAATTTTGAGAAGCTTTTTGAACAGGTAAAAACAGTTAACATTGACAATGCAGTAACTCTTACTGGTGTCATCTCACAAATATTTGAGAAGGCTTTGATGGAACCTACTTTCTGTGAAATGTATGCCAATTTCTGTTCACATCTGGCAGCTGAGCTGCCTGATTTTAGTGAAGACAATGAGAAGATAACTTTTAAGAGGTTATTATTAAACAAGTGCCAGGAAGAATTTGAGAGGGGTGAAAGAGAGCAGGAAGAAGCCAACAAGGCCGATGAAGGTGAGGTGAAGCAGTCTGCAGAAGAAAGGGAGGAGAAAAGAACAAAGGCTAGAAGACGCATGCTGGGTAATATCAGATTGATAGGAGAACTCTATAAGAAGAGAATGTTAACAGAGAGGATTATGCATGAGTGCATCAGAAAGTTATTGGGTCAGCATCAGGATCCAGATGAAGAAGATATTGAAGCTTTGTGCAAGCTCATGAGTACGATCGGGGAGATGATTGACCATCCCAAAGCCAAAGAGCATATTGATGATGAGATCATTATCAAACAACATGAATTTATCTTCAAGGGTGAGGTTCATGTTGAAAGATGCCATTGA 2310 0.4203 MKHSSPVNEVAVSVVSNNEEKGKESLSRSNSLKDTSKVQKEGQLQHLVAVQSPTVANVPSQDVKRSTGGSETVASKTNYSAAVTSEVVTATTEDTISTPSLSVPHSEAKSNGAAELSGSVSADGPAAQAVDSLKANDEPDEFSQLDKLSKNKDSEMGEKTEISSIQGCKQEVDESTGCPPEYVNQSSTALGSSTDVCLSRDDIAVGSEAVSASSGTLDQSSDILETTTECCGDGSENAGSVVSLPAPDTNDTPILDQNKVKTTSKGKKKRKEILQKADAAGSTSDLYNAYKGPEEKKDAVVSAEKEESVSTSGSLELSSTGAAQPDCITSELCGQSKAELDDWEDAADMSTPKLEFSGQTEQVTDSCTVTVKRYSRDFLLKFAEQCTNLPEGFEITADIAESLMGANINSSRDPHPSPGRIIDRPSGMSRMDRRGGAITEEDKWSKVSNSFHSGMRLDGIGGNAGFHPIQGGNFGVLRNPRSPLPYAGAGGILSGPMQSMGNLGGMPRNSSDSERWQRASSFQQRGLIPSPQSPLQMMHKADKKYEVGKVTDAEEAKQRQLKAILNKLTPQNFEKLFEQVKTVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCSHLAAELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKQSAEEREEKRTKARRRMLGNIRLIGELYKKRMLTERIMHECIRKLLGQHQDPDEEDIEALCKLMSTIGEMIDHPKAKEHIDDEIIIKQHEFIFKGEVHVERCH 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91256g00001 769 Gene3D - 550 760 - -
Stsc91256g00001 769 MobiDBLite consensus disorder prediction 649 678 - -
Stsc91256g00001 769 MobiDBLite consensus disorder prediction 407 433 - -
Stsc91256g00001 769 MobiDBLite consensus disorder prediction 1 20 - -
Stsc91256g00001 769 MobiDBLite consensus disorder prediction 290 304 - -
Stsc91256g00001 769 MobiDBLite consensus disorder prediction 1 192 - -
Stsc91256g00001 769 Pfam MIF4G domain 558 748 IPR003890 GO:0003723|GO:0005515
Stsc91256g00001 769 SMART if4_15 558 769 IPR003890 GO:0003723|GO:0005515
Stsc91256g00001 769 Coils Coil 640 672 - -
Stsc91256g00001 769 MobiDBLite consensus disorder prediction 31 117 - -
Stsc91256g00001 769 FunFam Eukaryotic translation initiation factor 4G 558 755 - -
Stsc91256g00001 769 MobiDBLite consensus disorder prediction 134 159 - -
Stsc91256g00001 769 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 100 747 IPR045208 GO:0003743
Stsc91256g00001 769 MobiDBLite consensus disorder prediction 305 321 - -
Stsc91256g00001 769 MobiDBLite consensus disorder prediction 242 260 - -
Stsc91256g00001 769 SUPERFAMILY ARM repeat 553 748 IPR016024 -
Stsc91256g00001 769 MobiDBLite consensus disorder prediction 208 321 - -
Stsc91256g00001 769 MobiDBLite consensus disorder prediction 209 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91256g00001 Stsc-Chr91256 4981 7389 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91256g00001 193 747 Eukaryotic Initiation Factors Gene Family AT3G60240 57.042 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91256g00001 K03260 - gmx:100790680 931.398