Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91249g00001 ATGCGAACAGGGAAGGGAGCGGCGCGGCTTGAGGTCTCATTGGTGGAGGATCCACAATACGGCGGCGGGCTCAGCAGTAGGGTCTTCTCTTATTTGACGTTCTGCACCTTCTTCAAGAACATAGCTTCCGACCTTACTGGACCGTCTTCTTTGGATGAGGAGCTCAGAGACGAAATAGATCTAACGATAAGGCTGTACAGCGAGGCTGCAGGCAGATGGCTCAAGCACACACGCGTACCGAAGATGAAGATATCAGCAGGAACTGTTGTTAACACCCAAATCTGTCATCCCAAGAACAATGACTTTTACATGTGTGCTCAGGATGGAATGATTGGAACAACTCGACCAATTCATTACCAAGTTTTGCATGATGAAATTTG 380 0.4816 MRTGKGAARLEVSLVEDPQYGGGLSSRVFSYLTFCTFFKNIASDLTGPSSLDEELRDEIDLTIRLYSEAAGRWLKHTRVPKMKISAGTVVNTQICHPKNNDFYMCAQDGMIGTTRPIHYQVLHDEI 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91249g00001 126 Pfam Piwi domain 80 126 IPR003165 GO:0003676
Stsc91249g00001 126 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 81 125 - -
Stsc91249g00001 126 SUPERFAMILY Ribonuclease H-like 77 125 IPR012337 -
Stsc91249g00001 126 Gene3D - 60 126 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91249g00001 Stsc-Chr91249 2976 3970 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91249g00001 84 125 Eukaryotic Initiation Factors Gene Family AT5G43810 59.524 5.71e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91249g00001 K11593 - gmx:100812218 77.0257