Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91245g00001 ATGTGCAAAGGTGCAGAAGAAAAAGAGCATGGTGGTGGTTTCTGTAGGAGCTTATTCACACATGAAGAGGGTGCTTCATCACAACTTTGTGGTTTAAAATCTTGTGAGCTATGTGGAGTTGAAGCTTCATTGTATTGCCAAGCTGATGATGCTTATTTGTGTAGAGAGTGTGACAAATGGGTTCATAAGGCAAATTTCTTGGCACTTAGACACATAAGGTGCTTCTTGTGCAACACGTGTCACAATCTTACAAGCAGATGTCTCATTGGAGCTTCAATGGAGATCATACTTCCACCCACATTCATTGAGAACATTCCTAACAACAACAACAACAATAGAGATTGTTCAAGAACACAAGACCCCCCTTTCAAATTTATCTAA 381 0.399 MCKGAEEKEHGGGFCRSLFTHEEGASSQLCGLKSCELCGVEASLYCQADDAYLCRECDKWVHKANFLALRHIRCFLCNTCHNLTSRCLIGASMEIILPPTFIENIPNNNNNNRDCSRTQDPPFKFI 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91245g00001 126 SMART bboxneu5 30 76 IPR000315 GO:0008270
Stsc91245g00001 126 CDD Bbox1_BBX-like 35 76 - -
Stsc91245g00001 126 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 34 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91245g00001 Stsc-Chr91245 6021 6654 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91245g00001 1 126 C2C2-CO-like Transcription Factor Family AT3G21890 40.769 1.44e-27 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91245g00001 - - hbr:110670331 150.214