Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91240g00006 ATGAAAGACAGACCACCCTTAACAGGTTATTGTGTGATACAATTTTTCCTACTTGGATTAGTTGGAATAACAATAAAAGAAGGATGTTACCTAGTCGGTCTAGATAACACATCGCCTACGTTTGCATCTGCTATGCAAAACTCAGTTCCAGCCTTGACTTTTCTGATGGCTGCAATACTCAGATATGAGAATGTGCACTTGAATAGGCTAGATGGTTTTGCTAAGGTTGTTGGAGTAATTGCTTCTGTTGGAGGAGCATCAATCATCACTCTTTACAAGGGACCTACAATCTATGCTCCATATTCAACATTGAATCATATGCAATCATTGCCTACGTTGGGGGATGCAGCAGGAAAGAACTGGAACTTGGGTTGCATCTGTCTCTTTGGTCACTGCTTATGTTGGTCTGCTTGGATTGTAATGCAAGCATCTGTTCTCAAAAAGTACTCTGCCCCACTCTCAGTTTCTGCCTTTACTTGCTCATTTGGCATCCTGCAATTTGTAACAATTGCAGCATTTTTCGAGAGAGATTACAAGGCCTGGCAATTCAATTCCAGTAGCGAGATCTTCAGTGTTTTGTATGCGGGACTGGTGACTTCAGGGCTAGCAGCAGCAATACAGATATGGGCTATTGCTAAGGGAGGGCCAGTCTTTGCTTCAATTTATCTGCCTTTACAGACATTAATGGTAGCCTTGATGGCGTCCATTCTTTTAGGGGAAGAGTTCTTCTTGGGAGGGATTATTGGAGCTTTATTGATCATAACAGGCTTATACCTTGTTGTGTGGGGAAAAAGTGAAGAAACCAAATATGCCAAAGAGGTCATAGCCCCTATGAGGTCCAAGAATCATGGTGAAGGAAATTGTGACAATGTTTCCATCATCCAGCCTTTGATCCTTACCCAAAACTCTTAG 912 0.4211 MKDRPPLTGYCVIQFFLLGLVGITIKEGCYLVGLDNTSPTFASAMQNSVPALTFLMAAILRYENVHLNRLDGFAKVVGVIASVGGASIITLYKGPTIYAPYSTLNHMQSLPTLGDAAGKNWNLGCICLFGHCLCWSAWIVMQASVLKKYSAPLSVSAFTCSFGILQFVTIAAFFERDYKAWQFNSSSEIFSVLYAGLVTSGLAAAIQIWAIAKGGPVFASIYLPLQTLMVALMASILLGEEFFLGGIIGALLIITGLYLVVWGKSEETKYAKEVIAPMRSKNHGEGNCDNVSIIQPLILTQNS 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91240g00006 303 SUPERFAMILY Multidrug resistance efflux transporter EmrE 9 78 - -
Stsc91240g00006 303 Pfam EamA-like transporter family 123 261 IPR000620 GO:0016020
Stsc91240g00006 303 SUPERFAMILY Multidrug resistance efflux transporter EmrE 181 265 - -
Stsc91240g00006 303 PANTHER WAT1-RELATED PROTEIN 13 272 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91240g00006 Stsc-Chr91240 22903 25371 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91240g00006 2 298 Nodulin-like Gene Family AT1G75500 59.355 2.01e-123 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91240g00006 - - ccaj:109801260 453.751