Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91240g00005 ATGGTGCCTGAGAGAGCTAAGCTACACTTAGGCTTAACCTTCCTACAATTTTGTCATGCTGGACATCATATAATGTTGAGAATTGCCCTCAATATGGGCATGAGCAAGCTAATCTTCCCAGTATATAGAAACATTACCGCCCTTATTCTTCTGGCTCCTCTTGCTTATTTTTCAGAGAAGAAAGACAGACCACCCTTAACAGGTTATTGTGTGATACAATTTTTCCTACTTGGATTAGTTGGAATAACAATAAAAGAAGGATGTTACCTAGTCGGTCTAGATAACACATCGCCTACGTTTGCATCTGCTATGCAAAACTCAGTTCCAGCCTTGACTTTTCTGATGGCTGCAATACTCAGATATGAGAATGTGCACTTGAATAGGCTAGATGGTTTTGCTAAGGTTGTTGGAGTAATTGCTTCTGTTGGAGGAGCATCAATCATCACTCTTTACAAGGGACCTACAATCTATGCTCCATATTCAACATTGAATCATATGCAATCATTGCCTACGTTGGGGGATGCAGCAGGAAAGAACTGGAACTTGGGTTGCATCTGTCTCTTTGGTCACTGCTTATGTTGGTCTGCTTGGATTGTAATGCAAGCATCTGTTCTCAAAAAGTACTCTGCCCCACTCTCAGTTTCTGCCTTTACTTGCTCATTTGGCATCCTGCAATTTGTAACAATTGCAGCATTTTTCGAGAGAGATTACAAGGCCTGGCAATTCAATTCCAGTAGCGAGATCTTCAGTGTTTTGTATGCGGGACTGGTGACTTCAGGGCTAGCAGCAGCAATACAGATATGGGCTATTGCTAAGGGAGGGCCAGTCTTTGCTTCAATTTATCTGCCTTTACAGACATTAATGGTAGCCTTGATGGCGTCCATTCTTTTAGGGGAAGAGTTCTTCTTGGGAGGGATTATTGGAGCTTTATTGATCATAACAGGCTTATACCTTGTTGTGTGGGGAAAAAGTGAAGAAACCAAATATGCCAAAGAGGTCATAGCCCCTATGAGGTCCAAGAATCATGGTGAAGGAAATTGTGACAATGTTTCCATCATCCAGCCTTTGATCCTTACCCAAAACTCTTAG 1089 0.4197 MVPERAKLHLGLTFLQFCHAGHHIMLRIALNMGMSKLIFPVYRNITALILLAPLAYFSEKKDRPPLTGYCVIQFFLLGLVGITIKEGCYLVGLDNTSPTFASAMQNSVPALTFLMAAILRYENVHLNRLDGFAKVVGVIASVGGASIITLYKGPTIYAPYSTLNHMQSLPTLGDAAGKNWNLGCICLFGHCLCWSAWIVMQASVLKKYSAPLSVSAFTCSFGILQFVTIAAFFERDYKAWQFNSSSEIFSVLYAGLVTSGLAAAIQIWAIAKGGPVFASIYLPLQTLMVALMASILLGEEFFLGGIIGALLIITGLYLVVWGKSEETKYAKEVIAPMRSKNHGEGNCDNVSIIQPLILTQNS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91240g00005 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 137 - -
Stsc91240g00005 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 324 - -
Stsc91240g00005 362 PANTHER WAT1-RELATED PROTEIN 12 331 IPR030184 GO:0016020|GO:0022857
Stsc91240g00005 362 Pfam EamA-like transporter family 18 147 IPR000620 GO:0016020
Stsc91240g00005 362 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91240g00005 Stsc-Chr91240 22903 25374 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91240g00005 2 357 Nodulin-like Gene Family AT1G75500 59.892 1.43e-152 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91240g00005 - - ccaj:109801260 546.584