Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91239g00007 ATGGAGAGTAAATCAATTGTTCTGTTGGAAAGATATGAGTTAGGAAGATTACTAGGGCAGGGTACCTTTGGGAAGGTTTACTATGCTCGGAGTGCGATAACTAACCAGAGTGTGGCTATTAAGATGATTGACAAAGATAAGGTTATGAAAACTGGGCGTGCCGAACAAATCACGCGTGAGATATCAGTTATGAGAAGGGCTAGGCATCCCAATATCATACAGCTTTTCGAGGTTATGGCCACCAAGACTAAGATTTACTTTGTTATTGAAATTGCTAAAGGTGGCGAGCTCTTCGACAAGGTGTCCAAGGGGAGACTCAAGGAAGACGTTGCACACAAGTATTTTAAGCAGCTAATCAATGCAGTAGATTATTGTCACAGTAGAGGTGTATACCACAGAGATATAAAGCCGGAGAACATACTGTTGGATGAAAATGGGGACCTAAAGATATCGGATTTCGGGTTAAGTGCGCTCGCCGAGTCCAAGCGACAGGATGGCTTACTCCATACGCCTTGTGGCACCCCTGCCTATGTTGCTCCTGAAGTCATTAGAAGGAAGGGATATGATGGTGCAAAAGCTGATATTTGGTCTTGTGGAGTAGTTCTATTTGTCTTATTGGCAGGTTTTCTTCCTTTTCATGATGCAAATTTAATAGAGATGTATAGGAAGATAAGCAAGGCTGAATTAAAATGCCCGAGCTGGTTCCCGCCAGAAGTATGCAGGTTATTGAGAAAGATGCTGGATCCAAATCCTGAAACCAGGATTACTATGGTCAAGATTACAGAAAATTCTTGGTTTAAGAGAGGACCTAAAGCTAAGCACAAAAAACTCGAAGCAGAAACCGCTAGTGTCTCTTCATCAGGTACAGTTTCTGATCTAAGTGATGAAGGTGAAGGTCAAGCAGCAGAAGCAAAGGAAGAATCAGTTGTGCCAACAAGTATAAATGCATTTGATATCATCTCCCTTTCTGCTGGTTTCGATCTTTCTACATTTTTCGAAGAGAGTTTTCAGAAAAGAGAAGCAAGGTTTAGTTCAAGACAACCTGCATCAGTCATCTTCTCCAAGCTGGAAGATGCTGCCAAGAAACTGAAGCTGAAAATAAAGAAAATAGCAGCTGGTTTGGTGAAATTGGATGGCTTAACCGAAGGTAGGAAGGGCGTTTTATCAATAGATGCTGAGATTTTCGAGGTTACTCCTATGTTCCATATGGTGGAGATGAAGAAGTCCAATGGAGACACATTGGAATACCAGAAAGTAGTGCAAGAGGGTATAAGACCTGCACTTCAGGATATTATTTGGGTATGGCAAAATGACCACCAGCAGCAGCCACAAGAGGCCGAACAACAGCCGCAGACAGATGAGCAGCCGCCACAACCACCAGAGTCATAA 1389 0.4269 MESKSIVLLERYELGRLLGQGTFGKVYYARSAITNQSVAIKMIDKDKVMKTGRAEQITREISVMRRARHPNIIQLFEVMATKTKIYFVIEIAKGGELFDKVSKGRLKEDVAHKYFKQLINAVDYCHSRGVYHRDIKPENILLDENGDLKISDFGLSALAESKRQDGLLHTPCGTPAYVAPEVIRRKGYDGAKADIWSCGVVLFVLLAGFLPFHDANLIEMYRKISKAELKCPSWFPPEVCRLLRKMLDPNPETRITMVKITENSWFKRGPKAKHKKLEAETASVSSSGTVSDLSDEGEGQAAEAKEESVVPTSINAFDIISLSAGFDLSTFFEESFQKREARFSSRQPASVIFSKLEDAAKKLKLKIKKIAAGLVKLDGLTEGRKGVLSIDAEIFEVTPMFHMVEMKKSNGDTLEYQKVVQEGIRPALQDIIWVWQNDHQQQPQEAEQQPQTDEQPPQPPES 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91239g00007 462 MobiDBLite consensus disorder prediction 286 305 - -
Stsc91239g00007 462 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91239g00007 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Stsc91239g00007 462 FunFam Aurora kinase A 4 95 - -
Stsc91239g00007 462 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 428 - -
Stsc91239g00007 462 Gene3D Kinase associated domain 1, KA1 312 434 - -
Stsc91239g00007 462 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Stsc91239g00007 462 FunFam Non-specific serine/threonine protein kinase 309 433 - -
Stsc91239g00007 462 Gene3D Phosphorylase Kinase; domain 1 5 98 - -
Stsc91239g00007 462 CDD CIPK_C 315 429 - -
Stsc91239g00007 462 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165
Stsc91239g00007 462 MobiDBLite consensus disorder prediction 438 462 - -
Stsc91239g00007 462 SUPERFAMILY Protein kinase-like (PK-like) 8 298 IPR011009 -
Stsc91239g00007 462 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91239g00007 462 MobiDBLite consensus disorder prediction 438 452 - -
Stsc91239g00007 462 FunFam Non-specific serine/threonine protein kinase 5 308 - -
Stsc91239g00007 462 Pfam NAF domain 311 369 IPR004041 GO:0007165
Stsc91239g00007 462 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91239g00007 462 Gene3D Transferase(Phosphotransferase) domain 1 99 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91239g00007 Stsc-Chr91239 31287 33535 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91239g00007 1 441 CBL-interacting serine-threonine protein kinases AT5G58380 66.520 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Stsc91239g00007 Pkinase 2.2e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91239g00007 - - gmx:100790905 680.248