Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91234g00004 ATGGAACAAGAAGAGGAGCCACAGCAAAATGAGCTGCCTCACTCTCACTGTCAATCTCGCTCCGTCACGCTACCTCCCGGTTGCCGGTTCCACCCTTCGGAGGAGCTTCTATTGCGTTACTATCTGAAAAACAAAAACGGCACCGGGAACTGGAACGTTAACGGTGGTGGTTTGGGATTCGACGGTTCTGATTTGATTCGGGAGCTGGATTTCTACGGTTACGATCCTTTTGAGTTGCCGGATTGTGCTTGCTTTGCGTACGGTTCCGGTGGGAGGAGGAGGCACTGGTACTGTTTCACTACCGTTAGGGTTTCGAGGGGAGAGAGGTGGAAAAGGGAGAGGAAGGTTAAGAGTGGGTTCTGGTTGAAGAAGGGAAGGGTTTCGAACGTTAACGGTGGTGTCGGGAACGTGGTTTTGGGAACGAGGACGAGGTTCGTTTTCTATTTGGGAAATTCGGTGAAGAACAGTGCCAAGACGGATTGGGTTTTGTATGAATACGCATTGATTGATCATGTTATGGCCTCTTTTGTTCTTTGCCGGGTATTTAGTAAGCCTCGTTATAAGAATAGTGCCTCGGACATTGGCCTGAGTTGTTGTGCAGAAGAGAGTGGATCAGCAGTGCGCCACATTGGTATTCAGCATGATGAACATGTTAGATCAGATGCTGTTGACCTCAAAGTATGTGATGATACCTCCATTGACAAAAACAATGAAATATGTCCTGGTGAAAACATCGATAATCAAATTAAGAATGCCCATGATGTAGATACTTTACAATATTCAGCAGGTCCTCAGGGAACTCAGCAGCTATCAATTGCAAACTTCTACATCAGCAATAATCTGAAAAGTCTAGTCAGAAATGGGGCTATCAGTGTTGGGAGTCAATTAGCGTTTCTATCTTCTTTACAATTACCTTTCCCCCTTCTGTCTTTTTTAGATTTGAGAACTCATTCATGA 957 0.4535 MEQEEEPQQNELPHSHCQSRSVTLPPGCRFHPSEELLLRYYLKNKNGTGNWNVNGGGLGFDGSDLIRELDFYGYDPFELPDCACFAYGSGGRRRHWYCFTTVRVSRGERWKRERKVKSGFWLKKGRVSNVNGGVGNVVLGTRTRFVFYLGNSVKNSAKTDWVLYEYALIDHVMASFVLCRVFSKPRYKNSASDIGLSCCAEESGSAVRHIGIQHDEHVRSDAVDLKVCDDTSIDKNNEICPGENIDNQIKNAHDVDTLQYSAGPQGTQQLSIANFYISNNLKSLVRNGAISVGSQLAFLSSLQLPFPLLSFLDLRTHS 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91234g00004 318 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 24 211 - -
Stsc91234g00004 318 MobiDBLite consensus disorder prediction 1 21 - -
Stsc91234g00004 318 Pfam No apical meristem (NAM) protein 25 168 IPR003441 GO:0003677|GO:0006355
Stsc91234g00004 318 ProSiteProfiles NAC domain profile. 24 184 IPR003441 GO:0003677|GO:0006355
Stsc91234g00004 318 SUPERFAMILY NAC domain 16 184 IPR036093 GO:0003677|GO:0006355
Stsc91234g00004 318 Gene3D NAC domain 33 188 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91234g00004 Stsc-Chr91234 20840 24701 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91234g00004 23 184 NAC Transcription Factor Family AT1G69490 32.948 3.02e-21 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Stsc91234g00004 NAM 5.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91234g00004 - - aip:107605653 508.449