Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc91229g00008 | ATGAGATTGTCTTATAGCCCGGCTGCCCAGTTTTTCCTTTTCTTAGTCCAGTGGACTGATTGTCACCTCGCCGGAGCGTTAGGATTGCTAAGAGTTCTCATCTACAAGGTATTTGAAATGTTGCAGACATATGAGGATGGGAAGACAACCATGTCGGTTTATGAAAGAAAAGCTAGTTTGAAGGAGTTCTATAGTGTGATCTTTCCTTCTTTATTACAACTTCAGAGAGGAATCACTGATGTAGAAGACAGGAAACAAAAAGATCTATGTGCTATGAAGTACAGGCTGAGAGATACGGCAGGAAAAGGGAAATTATCTGAGATTGATATCGAAAGAGAAGAAGAATGTGGTATTTGCTTGGAGGTGAACAGCAAGGTCGTGTTGCCGAATTGCTACCATTCGATGTGTATGAAATGCTACCGAGACTGGCGCGTGCGATCGCAGTCTTGCCCTTTCTGCCGGGAAAGCCTTAAGAGAGTTAACTCCGGCGACCTTTGGATATATATGAGCAACAAGGAAATGGATGACTTGGCTTCAATCAACAAGGAGAACTTAAAGAGGCTGTTTATGTACATTGACAAGTTACCTCTAATTGTGCCAGATCCTATGTTCTTGACTTATCCTCCACATCGTTTCTGA | 639 | 0.4257 | MRLSYSPAAQFFLFLVQWTDCHLAGALGLLRVLIYKVFEMLQTYEDGKTTMSVYERKASLKEFYSVIFPSLLQLQRGITDVEDRKQKDLCAMKYRLRDTAGKGKLSEIDIEREEECGICLEVNSKVVLPNCYHSMCMKCYRDWRVRSQSCPFCRESLKRVNSGDLWIYMSNKEMDDLASINKENLKRLFMYIDKLPLIVPDPMFLTYPPHRF | 212 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc91229g00008 | 212 | PANTHER | RING FINGER PROTEIN 41, 151 | 1 | 205 | - | - | |
Stsc91229g00008 | 212 | ProSiteProfiles | Zinc finger RING-type profile. | 116 | 154 | IPR001841 | - | |
Stsc91229g00008 | 212 | SUPERFAMILY | RING/U-box | 105 | 159 | - | - | |
Stsc91229g00008 | 212 | Pfam | Zinc finger, C3HC4 type (RING finger) | 113 | 159 | - | - | |
Stsc91229g00008 | 212 | ProSitePatterns | Zinc finger RING-type signature. | 131 | 140 | IPR017907 | - | |
Stsc91229g00008 | 212 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 91 | 163 | IPR013083 | - | |
Stsc91229g00008 | 212 | SMART | ring_2 | 116 | 153 | IPR001841 | - | |
Stsc91229g00008 | 212 | FunFam | RING/U-box superfamily protein | 96 | 163 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc91229g00008 | Stsc-Chr91229 | 23597 | 25173 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc91229g00008 | 60 | 158 | C3H Transcription Factor Family | AT5G01960 | 28.846 | 9.18e-06 | 43.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc91229g00008 | K25840 | - | gmx:100819267 | 354.369 |