Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91229g00001 ATGTCTGCACTCGCAATGGTAACTGCAGCAGCATCATCCTTTATGGGAACACGTTTCATAGAGTTGTACTCCAATTCAGGCAAAGTACAAGCTCGATTTGGGTTTGGATCCAAGAAGAGTAGCCCAGCAAAGAAGGGTTCTAGGCAACCCACCTCTGATAGACCACTCTGGTACCCTGGTGCAAAAGCACCAGAGTATTTAGACGGTAGCCTAGTAGGTGACTATGGATTTGATCCCTTTGGTTTAGGAAAGCCAGCAGAGTACCTCCAATATGACTTGGACTCACTCGATCAGAACTTGGCCAAGAACGTTGCAGGTGATATTATTGGGACAAGGACAGAAGTGTCAGATGTGCAGTCAACACCATTTCAACCATATAACGAGGTTTTTGGGCTGCAGAGGTTTAGGGAGTGTGAACTCATCCACGGAAGGTGGGCTATGTTGGCCACACTAGGTGCTCTCACAGTTGAGTGGCTCACTGGTATTACATGGCAAGATGCTGGCAAGGTGGAGCTTATAGAAGGGTCACAATACCTAGGTCAACCCCTTCCATTCTCACTTACCACATTGATTTGGATTGAAGTTCTAGTGATTGGGTACATTGAGTTCCAGAGGAATGCAGAGCTTGACCCAGAGAAGAGGCTTTACCCGGGTGGCAAGTTCTTTGACCCATTGGGCCTCGCTGAAGACCCAGAGAAGAAGTCCAGACTTCAATTGGCTGAGATCAAGCATGCTCGCCTTGCTATGGTTGCCTTCTTAGGGTTTGCAGTCCAAGCTGCTGTAACTGGCAAAGGCCCACTTAACAATTGGGCTACCCATTTGAGTGACCCACTTCACACTACCATCATTGATAACTTCTCTTCTTGA 867 0.4752 MSALAMVTAAASSFMGTRFIELYSNSGKVQARFGFGSKKSSPAKKGSRQPTSDRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRTEVSDVQSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELIEGSQYLGQPLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKSRLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91229g00001 288 MobiDBLite consensus disorder prediction 35 58 - -
Stsc91229g00001 288 Gene3D Chlorophyll a/b binding protein domain 57 288 - -
Stsc91229g00001 288 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 6 284 IPR001344 GO:0009765|GO:0016020
Stsc91229g00001 288 FunFam Chlorophyll a-b binding protein, chloroplastic 106 288 - -
Stsc91229g00001 288 SUPERFAMILY Chlorophyll a-b binding protein 49 286 - -
Stsc91229g00001 288 Pfam Chlorophyll A-B binding protein 63 259 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91229g00001 Stsc-Chr91229 2362 4049 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91229g00001 15 288 Chloroplast and Mitochondria Gene Families AT3G08940 82.909 1.16e-173 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91229g00001 K08915 - rcu:8267514 515.768