Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91223g00002 ATGGACTCCAAAACAGAAAGTGGGAACTCAAGTGGCACTGATCAATCAGAGCCAAAGAATATATACAAAGATCCAGATGATGGACGACAACGATTTTTGCTTGAATTGGAATTTGTTCAATGCCTTGCTAACCCCACCTACATTCACTATTTGGCTCAAAATCGGTATTTTGAGGATGAAGCTTTCATTGGATACTTAAAGTATCTTCAATATTGGCAGCGACCTGAGTATCTTAAATTTATTATGTATCCTCATTGCCTCTATTTTCTTGAGCTTCTACAAAATGCAAATTTTCGCAATGCAATGGCACATCCTAACAATAAGGAGCTGGCACATAGGCAACAATTCTACTTCTGGAAGAACTACCGGAACAATCGGCTAAAACACATTTTGCCTAGATCACTTCCCGAACCTGCTGCCACAACCGCCGCTGCAACTCCAGCTCAGCCACCTGTGCCGGCGGCATTGCCACCAGTACCTGCCACAAATGTTGCAGTGACAGCTACATCTGCTCAAACTCAAGCCCCTTCTCCGATGCCGTATGGTATGCCCCCTGCATCTGGTCTTGCAAAAAATGAAATGAGGAATCCTTCAATGGATAGAAGGAAGAGGAAGTGA 618 0.4369 MDSKTESGNSSGTDQSEPKNIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYLKFIMYPHCLYFLELLQNANFRNAMAHPNNKELAHRQQFYFWKNYRNNRLKHILPRSLPEPAATTAAATPAQPPVPAALPPVPATNVAVTATSAQTQAPSPMPYGMPPASGLAKNEMRNPSMDRRKRK 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91223g00002 205 MobiDBLite consensus disorder prediction 165 205 - -
Stsc91223g00002 205 Pfam SOH1 30 122 IPR008831 GO:0003712|GO:0006355|GO:0016592
Stsc91223g00002 205 FunFam Mediator of RNA polymerase II transcription subunit 31 18 119 - -
Stsc91223g00002 205 MobiDBLite consensus disorder prediction 1 18 - -
Stsc91223g00002 205 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 9 205 IPR008831 GO:0003712|GO:0006355|GO:0016592
Stsc91223g00002 205 MobiDBLite consensus disorder prediction 1 23 - -
Stsc91223g00002 205 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 17 119 IPR038089 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91223g00002 Stsc-Chr91223 16018 19008 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Stsc91223g00002 Med31 2.1e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91223g00002 K15153 - gmx:100818057 314.309