Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91220g00003 ATGATTGTAGCTGAAATTGTTCCTCACAAGCACCAAGTTTCCATGGCAAATCATCATCAATTTTACACCAATCAACTCTCTCTGCCTTTACTACTAATACTTGTTATTCAATTCTCATCACTTCAGCTCCACTCTCACGGATATGATTCCCAAAACAAGTACTTCATCAACTGCGGATCGAGCAGCAATGCTAATGACACCGAAAGTGGGAAGACTTACGTTGCGGATTCGAGCCAAGTCAGTTTCAGCAAGCGAAGCAAAACAGGAACCAACCAATCATCAGTTCCTTCACCTATCTACCAAGCAGCAAGAATCTTCACAACTCAATCATTCTATGAGTTCCCAATTGACACAGCTGGCACCTACATAGTACGCCTTCACTTCCTTGCTTTCACTTCACCAAGTAACCTCTCTTCTGCAACCTTCAATGTCTCGGTTCCCAATTTCATGCTGCTGCAAAACTTCACGACCAAGAACTACACAAAATCTCCTCTGGTTAAAGAGTATTACGTGAAGATACCTCTTGGTAAATTCAGAATCACTTTCGTCCCTCTTCGTTCCTCGTTTGCCTTTGTGAATGCCATTGAAGTCTTCCTACTCCCCCGCTTCTTAATCACTGATGAAGTCGCAGGTTTTGTTCCACAACCTGCAATTGGACAAAATTCCTTGTTCAGATACAGTGGGCTACTCTCTCTAGCGTTGGAAACTAAACACAGGATCAACGTTGGTGTCACTAACGTCACAAGTAAAGCAGATCCCTTATGGAGAACCTGGTCTTCTGATGACACTTACCTTGTTAATCCTCAAAGTGCCCAATATTTTCAATATGATGGTACTATTCCGCCCAAGGTACGTAATGATGACGACGGTCCAAATGCTAATAGCTATACTGCGCCGTTTAGAGATGTTTACGGAACAGCTAAATGGATTAATGATACCAACTTAACCTGGAGTCTTCCTGTGGAAAAGAATGTAGACCACCTCATTCGGTTTCACTTCTGTGACCTTTGGTCTCAGCTGCCTGACCTTACGTTTTTCGGTCTCTCCATATATGATCAACCTGCTTTGGTCATTGGTAACGATTCAAATGTATCTACAATTATGCCGGCGCCTTATTATTATGATCTTATGGTACAGTCCGATAATTCTGGTTTTTTCCGGATCACTGTCGAGCCGAATGCCTCAGCTAATATTGTTAGAGCTTTCTTGAACGGTCTGGAAATAATGCAAACTGTTAATTCTTCTGATTTGAGTTACTTGCAAGGCCAATCTAGTGGTAAGAATAGTATTCTTCCAGTGGTGTTGGGCTCGGTTCTTGGAGGTTTGGTCTTGGTTTCGGTGATGGTGGTTGTTGTTTTCATTTGGCGTTTTAAGACTAATAAACAGAAGCCGGTTGAAGGTTCAGATTGGTTGCCAATTCCTGCCACCGCAGGGGGAAGCTCTCACAGCCGAACAAGCCGGTTGACGGACGGAACCATTCAAGGCTCTCCTCTTCGCAACATTAATCTCGGACTAAAGATTCCTCTGCAGGATCTTCAGTTGGCAACCAAGAACTTCGGCGAGAAGCAGATAATTGGAAAGGGTGGTTTTGGCAATGTCTACAAGGGAGTTCTCAAGAATGGCATGAAGGTAGCAGTTAAGAGGAGTCAGCCAGGGTCCGGTCAGGGCCTACCGGAGTTTCAGACTGAGATCATGGTTTTGTCCAAGATTCGCCACCGGCACCTCGTTTCCTTGATTGGTTACTGCGATGAAAGGTACGAGATGATACTTGTTTATGAGTACATGGAGAAAGGGACATTGAGGGATCACTTGTATAACACGAAATCGCCAAGCTTGAGTTGGAAGCAAAGGCTTGAAATTTGCATTGGAGCTGCAAGAGGACTTCAGTACCTTCACAAAGGCGCGTCCGGGGGAATCATTCACCGAGATGTTAAGTCCACAAACATTCTCCTTGATGAGANNNNNNNNNNGAGAACAGGTCCTCTTGATCAGCATTCATATGTCAGCACGGGTGTTAAAGGAACTTTTGGTTATCTTGATCCGGAGTATTTCCGGTCGCAGCAGCTGACGGAAAAATCTGATGTCTATTCATTTGGTGTAGTTCTTTTAGAAGTTTTGTGTGCCAGGCCGGCTATCGAGCCTTCGCTTCCAAGGGAGCAAGTGAACCTGGCTGAATGGGGAATCCTTTGCAAGAACAAAGGGATTCTGGATGACATCATTGATCCTACCATCAAGGGACAACTAGATCAAAACTCGTTCCGCAAATTTAGCGAGACTATAGAGAAATGCTTGCAAGAAGATGGTTCTGATCGGCCAACAATGGGTGATGTGTTGTGGGACTTGGAGTATGCGCTGCAGCTTCAGCGCGGCGCGATACACAGAGAACCGCACGAGGATAGTTCTAGTGGCACGTCTGCATCGTTCCAGTTGCCCAATGTCCGGCGTCTTCCTTCACTCTCCACACTCAGCGAAGTGGATGACATGTCAATTGCTAGGGGTGATCAATCTGATGCTGCAGATGATTCGGTTTTTTCTCAGTTAAATATCAATGAAGCCAGATAA 2562 0.4465 MIVAEIVPHKHQVSMANHHQFYTNQLSLPLLLILVIQFSSLQLHSHGYDSQNKYFINCGSSSNANDTESGKTYVADSSQVSFSKRSKTGTNQSSVPSPIYQAARIFTTQSFYEFPIDTAGTYIVRLHFLAFTSPSNLSSATFNVSVPNFMLLQNFTTKNYTKSPLVKEYYVKIPLGKFRITFVPLRSSFAFVNAIEVFLLPRFLITDEVAGFVPQPAIGQNSLFRYSGLLSLALETKHRINVGVTNVTSKADPLWRTWSSDDTYLVNPQSAQYFQYDGTIPPKVRNDDDGPNANSYTAPFRDVYGTAKWINDTNLTWSLPVEKNVDHLIRFHFCDLWSQLPDLTFFGLSIYDQPALVIGNDSNVSTIMPAPYYYDLMVQSDNSGFFRITVEPNASANIVRAFLNGLEIMQTVNSSDLSYLQGQSSGKNSILPVVLGSVLGGLVLVSVMVVVVFIWRFKTNKQKPVEGSDWLPIPATAGGSSHSRTSRLTDGTIQGSPLRNINLGLKIPLQDLQLATKNFGEKQIIGKGGFGNVYKGVLKNGMKVAVKRSQPGSGQGLPEFQTEIMVLSKIRHRHLVSLIGYCDERYEMILVYEYMEKGTLRDHLYNTKSPSLSWKQRLEICIGAARGLQYLHKGASGGIIHRDVKSTNILLDEXXXXRTGPLDQHSYVSTGVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEVLCARPAIEPSLPREQVNLAEWGILCKNKGILDDIIDPTIKGQLDQNSFRKFSETIEKCLQEDGSDRPTMGDVLWDLEYALQLQRGAIHREPHEDSSSGTSASFQLPNVRRLPSLSTLSEVDDMSIARGDQSDAADDSVFSQLNINEAR 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91220g00003 853 PANTHER OS07G0166700 PROTEIN 506 788 IPR045272 GO:0004714|GO:0006468
Stsc91220g00003 853 FunFam Receptor-like protein kinase FERONIA 595 803 - -
Stsc91220g00003 853 FunFam receptor-like protein kinase FERONIA 483 594 - -
Stsc91220g00003 853 SMART serkin_6 519 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91220g00003 853 MobiDBLite consensus disorder prediction 826 853 - -
Stsc91220g00003 853 Gene3D Transferase(Phosphotransferase) domain 1 595 802 - -
Stsc91220g00003 853 SUPERFAMILY Protein kinase-like (PK-like) 505 782 IPR011009 -
Stsc91220g00003 853 Gene3D Phosphorylase Kinase; domain 1 483 594 - -
Stsc91220g00003 853 FunFam Putative receptor-like protein kinase 53 201 - -
Stsc91220g00003 853 Pfam Protein tyrosine and serine/threonine kinase 522 778 IPR001245 GO:0004672|GO:0006468
Stsc91220g00003 853 ProSiteProfiles Protein kinase domain profile. 519 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91220g00003 853 MobiDBLite consensus disorder prediction 839 853 - -
Stsc91220g00003 853 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
Stsc91220g00003 853 Gene3D - 49 199 - -
Stsc91220g00003 853 Gene3D - 232 413 - -
Stsc91220g00003 853 ProSitePatterns Protein kinases ATP-binding region signature. 525 547 IPR017441 GO:0005524
Stsc91220g00003 853 Pfam Malectin-like domain 56 410 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91220g00003 Stsc-Chr91220 8054 11053 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91220g00003 22 853 Receptor kinase-like Gene Family AT2G23200 42.546 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc91220g00003 Malectin_like 1.3e-24 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91220g00003 - - mtr:25493508 979.933