Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91216g00002 ATGCGTCCGCCGTTGAAGAGAGTCGATTTCCGTCCAGGCGACAAGGTGGAGGTTTGCAGCAAAGAAGAAGGCTTCCTCGGTTCATACTACGAGGCAACCGTTCTTTCCCGCCACGAAACCGGCCGTTACGTCGTCCGTTACAAGACACTCCTCCGTGACGACGCCGTTTCGGAGCCGTTAACCAAAACGCTCTTCCCAAGGGACATCCGCCCTTCCCCTCCGAAGGTATATACTCGCGGCGAATTCTCTCTCTACCAGGCAGTCGACGCCTTCGACAACGACGGTTGGTGGTCCGGCGAGATCACCGGAAGAATTGGGCCCCACCATTACTATGTTTATTTCCGTACAACCAATGAAGAGATCGCTTATCCTTCCAGTAAGATTAGGGTTCATCATGAGTGGGTTAATGGCGACTGGATTCTCTCTCAAAGAGAACCGCCACAGCCACAGCTACAGCAGCAGAACCAGGATCAGGAAGAACAGTTAGGTCAACAATTCAATTGA 504 0.5258 MRPPLKRVDFRPGDKVEVCSKEEGFLGSYYEATVLSRHETGRYVVRYKTLLRDDAVSEPLTKTLFPRDIRPSPPKVYTRGEFSLYQAVDAFDNDGWWSGEITGRIGPHHYYVYFRTTNEEIAYPSSKIRVHHEWVNGDWILSQREPPQPQLQQQNQDQEEQLGQQFN 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91216g00002 167 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 9 146 - -
Stsc91216g00002 167 Pfam Agenet domain 13 74 IPR008395 -
Stsc91216g00002 167 CDD Tudor_Agenet_AtDUF_rpt1_3 10 74 - -
Stsc91216g00002 167 MobiDBLite consensus disorder prediction 146 167 - -
Stsc91216g00002 167 SMART agenet_At_2 80 136 IPR014002 -
Stsc91216g00002 167 SMART agenet_At_2 8 77 IPR014002 -
Stsc91216g00002 167 CDD Tudor_Agenet_AtDUF_rpt2_4 88 130 - -
Stsc91216g00002 167 Gene3D - 2 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91216g00002 Stsc-Chr91216 15361 15864 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91216g00002 20 134 PHD Transcription Factor Family AT5G58610 29.630 1.09e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91216g00002 - - adu:107478045 292.352