Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91207g00002 ATGGAATGTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGCGAATTGGTAAAAGTAAAGGGCATCATTCTGAAGCGGAAGATCGGCGAGGGGTCGTTCTCGGCAGTGTGGAGGGCGGAGGAGAGAGGCAGCGGCGAAGAGGTGGCGGTGAAGCAGGTGTTCCTCTCCAAACTGAGCCCTCGCCTGAAGTCATCCTTCCACTGCGAGCTCAACTTCTTGTCCTCCGTCAACCACCCCAACATCGTTCGCCTCCTCAATTTCTTCCAGGATGATGGATGTGCGTACTTGGTGATGGAGTTTTGTGCTGGAGGGAACCTTGCTTCTTATATCCGATGCCATGGCAGAGTTGAACAACAAACTGCGAGAAGATTCATGCAGCAGCTTGGTGCTGGTATGAAAATATTACAAAGTCATGGTATCATTCATAGAGATTTGAAACCAGAGAACATTTTGCTATCAAAACCTGGAGATGATGCGGTTCTAAAGATAGCAGACTTTGGTCTCTCAAGAACTATACTTCCGGGCGAGTATGCGGAGACAGTCTGTGGTACGCCATTATACATGGCACCAGAAGTTCTTCAGTTCCAGAAATATGATAGCAAGGTTTCGCCGGCCGTCTTATCTTTTAAGTGTTAA 642 0.472 MECEEEEEEEEEEEESELVKVKGIILKRKIGEGSFSAVWRAEERGSGEEVAVKQVFLSKLSPRLKSSFHCELNFLSSVNHPNIVRLLNFFQDDGCAYLVMEFCAGGNLASYIRCHGRVEQQTARRFMQQLGAGMKILQSHGIIHRDLKPENILLSKPGDDAVLKIADFGLSRTILPGEYAETVCGTPLYMAPEVLQFQKYDSKVSPAVLSFKC 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91207g00002 213 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Stsc91207g00002 213 SUPERFAMILY Protein kinase-like (PK-like) 21 204 IPR011009 -
Stsc91207g00002 213 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Stsc91207g00002 213 Pfam Protein kinase domain 27 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91207g00002 213 Gene3D Transferase(Phosphotransferase) domain 1 4 205 - -
Stsc91207g00002 213 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 11 204 IPR045269 GO:0004674|GO:0006914
Stsc91207g00002 213 Coils Coil 1 21 - -
Stsc91207g00002 213 SMART serkin_6 24 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91207g00002 213 ProSiteProfiles Protein kinase domain profile. 24 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91207g00002 Stsc-Chr91207 7793 9763 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91207g00002 28 205 CBL-interacting serine-threonine protein kinases AT5G35410 41.758 6.62e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Stsc91207g00002 Pkinase 4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91207g00002 - - lja:Lj1g3v1289070.2 300.827