Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91207g00001 ATGGAATGTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGCGAATTGGTAAAAGTAAAGGGCATCATTCTGAAGCGGAAGATCGGCGAGGGGTCGTTCTCGGCAGTGTGGAGGGCGGAGGAGAGAGGCAGCGGCGAAGAGGTGGCGGTGAAGCAGGTGTTCCTCTCCAAACTGAGCCCTCGCCTGAAGTCATCCTTCCACTGCGAGCTCAACTTCTTGTCCTCCGTCAACCACCCCAACATCGTTCGCCTCCTCAATTTCTTCCAGGATGATGGATGTGCGTACTTGGTGATGGAGTTTTGTGCTGGAGGGAACCTTGCTTCTTATATCCGATGCCATGGCAGAGTTGAACAACAAACTGCGAGAAGATTCATGCAGCAGCTTGGTGCTGGTATGAAAATATTACAAAGTCATGGTATCATTCATAGAGATTTGAAACCAGAGAACATTTTGCTATCAAAACCTGGAGATGATGCGGTTCTAAAGATAGCAGACTTTGGTCTCTCAAGAACTATACTTCCGGGCGAGTATGCGGAGACAGTCTGTGGTACGCCATTATACATGGCACCAGAAGTTCTTCAGTTCCAGAAATATGATAGCAAGGCAGATATGTGGAGTATTGGGGCTATTCTGTTTGAGCTTCTAAACGGCTACCCTCCTTTCAATGGCAGAAATAATGTTCAGCTGTTGAAGAATATCACATCCTCTACCGGCTTGCCATTTTCTCATATGATTCTTTTGGGATTGGATGCTGATTGTATTGATGTTTGTTCAAAACTACTATGCTCAAATCCAGTCCATCGCCTATCTTTCGATGAATTTTATCGGCATCGGTTTCTACGTAGAAAGTGA 858 0.4534 MECEEEEEEEEEEEESELVKVKGIILKRKIGEGSFSAVWRAEERGSGEEVAVKQVFLSKLSPRLKSSFHCELNFLSSVNHPNIVRLLNFFQDDGCAYLVMEFCAGGNLASYIRCHGRVEQQTARRFMQQLGAGMKILQSHGIIHRDLKPENILLSKPGDDAVLKIADFGLSRTILPGEYAETVCGTPLYMAPEVLQFQKYDSKADMWSIGAILFELLNGYPPFNGRNNVQLLKNITSSTGLPFSHMILLGLDADCIDVCSKLLCSNPVHRLSFDEFYRHRFLRRK 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91207g00001 285 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Stsc91207g00001 285 SMART serkin_6 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91207g00001 285 ProSiteProfiles Protein kinase domain profile. 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91207g00001 285 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 11 283 IPR045269 GO:0004674|GO:0006914
Stsc91207g00001 285 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Stsc91207g00001 285 Pfam Protein kinase domain 27 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91207g00001 285 Gene3D Transferase(Phosphotransferase) domain 1 16 285 - -
Stsc91207g00001 285 Coils Coil 1 21 - -
Stsc91207g00001 285 SUPERFAMILY Protein kinase-like (PK-like) 21 283 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91207g00001 Stsc-Chr91207 7793 9763 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91207g00001 26 284 CBL-interacting serine-threonine protein kinases AT2G30360 35.849 1.19e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Stsc91207g00001 Pkinase 7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91207g00001 - - lja:Lj1g3v1289070.2 434.491