Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc91203g00001 | ATGGCATCATCAAGTTCTTACAACTCTCCATGTGCTGCTTGCAAATTCTTGAGGAGAAAGTGTTTGCCAGGATGCATCTTTGCACCTTACTTCCCACCAGAGGAGCCCCAGAAATTCGCCAATGTTCACAAGATCTTCGGAGCAAGCAATGTTACCAAACTTCTTAACGAGCTTCTGCCTCAGCAGAGGGAAGACGCTGTGAATTCCCTCGCGTACGAGGCAGAAGCTCGTGTGAGAGACCCTGTTTATGGTTGTGTTGGTGCCATCTCGTACCTTCAGAGACAAGTCCAGAGGCTTCAAAAGGAACTCGATGCCGCCAACGCGGATCTTCTTCGCTATGCTTGCAATGAAATCCCTCCACATCATCATATCCCTACTTTGGCACCACCATTAACTCCAACAATTCATCATCAACTTACACAAAGGCACTTTGGTGGTACAAGAATTGGAAATGATCATGGATTTGGATTTTATAGGCAATCTCCAACCACTTATTCCTTCCCTTATTCTCTTCCATGGAATGAGGACATCAATGGTGGAGGAGCTGAAGGAGGAGGTAATTTATGA | 567 | 0.4586 | MASSSSYNSPCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPQQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVQRLQKELDAANADLLRYACNEIPPHHHIPTLAPPLTPTIHHQLTQRHFGGTRIGNDHGFGFYRQSPTTYSFPYSLPWNEDINGGGAEGGGNL | 188 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc91203g00001 | 188 | Coils | Coil | 89 | 116 | - | - | |
Stsc91203g00001 | 188 | Pfam | Lateral organ boundaries (LOB) domain | 10 | 107 | IPR004883 | - | |
Stsc91203g00001 | 188 | ProSiteProfiles | LOB domain profile. | 9 | 110 | IPR004883 | - | |
Stsc91203g00001 | 188 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 8 | 124 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc91203g00001 | Stsc-Chr91203 | 8629 | 9476 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc91203g00001 | 1 | 113 | AS2 family | AT5G63090 | 93.860 | 4.77e-73 | 216 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Stsc91203g00001 | LOB | 3.7e-42 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc91203g00001 | - | - | gmx:100799774 | 272.322 |