Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91199g00003 ATGGTGGTACATAGAGACCTGAAACCTGAGAATTTGCTTTTAGACTCTAAATGCAATGTCAAGATTGCTGATTTTGGTTTAAGCAACATCATGCGGGATGGCCACTTTTTGAAGACAAGTTGTGGGAGCCCTAACTATGCTGCTCCAGAGGTTATCTCTGGGAAATTGTATGCTGGACCTGAAGTAGATGTCTGGAGCTGTGGTGTAATTCTATATGCCCTTCTCTGTGGCACACTTCCCTTTGATGATGAAAACATTCCAAACCTCTTCAAGAAAATAAAGGGTGGCATATACACCCTTCCTAGTCATCTATCGCCTGGTGCTAGAGATTTGATACCAAGGATGCTTGTGGTGGATCCCATGAAGAGGATGACTATACCTGAAATACGTCAACACCCATGGTTCCAAGCTCGTCTTCCGCGATATTTAGCAGTGCCACCACCAGATACAATGCAACAAGCCAAAAAGATTGACGAAGAGCTTCTTCAGGAAGTGGTTAATATGGGATTTGACAGAAATCAGTTGATTGAATCTCTACGCAACAGGATCCAAAATGAGGGTACTGTGGCATACTACTTGTTATTGGACAACCGGTTCCGTGTTTCTAGCGGCTATCTTGGAGCCGAGTTTCAAGAGACCATGGATGCTGGTTTCAATCGTATCCATTCCAGTGAAGTTTCTTCTCCAGTTGCTGGGCACCGCTTTCCAGGTTTTATGGACTATCAAGTAGGAATGAGACCACAGATCCCTGTTGAGAGAAAATGGGCCCTTGGACTTCAGTCTCGAGCCCATCCTCGAGAAATAATGACTGAGGTCCTTAAAGCTCTCCAAGAATTAAACGTATGCTGGAAGAAGATAGGACATTACAACATGAAATGCAGATGGGTTGCTGGCATTCCTGGTCATCATGAAGGAATGGTTAACAATTCTCTGCATAGTAATCATTATTTCGGGAATGACTCCAACATCATTGAGAATGATGCTGTTTCTAAGTCAAATGTGGTCAAGTTCGAAGTGCAGCTTTACAAAACTCGCGAGGATAAGTATCTGCTTGACCTTCAGAGGGTCCAAGGTCCCCAGTTTCTTTTCTTGGATCTTTGTGCTGCTTTCCTTGCACAGCTCCGTGTTCTCTAA 1134 0.4392 MVVHRDLKPENLLLDSKCNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRMTIPEIRQHPWFQARLPRYLAVPPPDTMQQAKKIDEELLQEVVNMGFDRNQLIESLRNRIQNEGTVAYYLLLDNRFRVSSGYLGAEFQETMDAGFNRIHSSEVSSPVAGHRFPGFMDYQVGMRPQIPVERKWALGLQSRAHPREIMTEVLKALQELNVCWKKIGHYNMKCRWVAGIPGHHEGMVNNSLHSNHYFGNDSNIIENDAVSKSNVVKFEVQLYKTREDKYLLDLQRVQGPQFLFLDLCAAFLAQLRVL 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91199g00003 377 ProSiteProfiles Protein kinase domain profile. 1 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91199g00003 377 Gene3D Kinase associated domain 1, KA1 258 375 - -
Stsc91199g00003 377 SMART uba_6 158 195 IPR015940 -
Stsc91199g00003 377 SUPERFAMILY Protein kinase-like (PK-like) 2 151 IPR011009 -
Stsc91199g00003 377 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 156 196 IPR015940 -
Stsc91199g00003 377 Pfam UBA/TS-N domain 157 193 IPR015940 -
Stsc91199g00003 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 2 14 IPR008271 GO:0004672|GO:0006468
Stsc91199g00003 377 FunFam Maternal embryonic leucine zipper kinase 1 205 - -
Stsc91199g00003 377 SUPERFAMILY KA1-like 192 376 IPR028375 -
Stsc91199g00003 377 CDD AMPKA_C 252 374 - -
Stsc91199g00003 377 SUPERFAMILY UBA-like 145 194 IPR009060 GO:0005515
Stsc91199g00003 377 SMART serkin_6 1 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91199g00003 377 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 328 376 IPR001772 -
Stsc91199g00003 377 CDD UBA_SnRK1_plant 157 197 - -
Stsc91199g00003 377 Gene3D Transferase(Phosphotransferase) domain 1 1 213 - -
Stsc91199g00003 377 Pfam Protein kinase domain 2 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91199g00003 377 PANTHER SERINE/THREONINE KINASE 1 200 - -
Stsc91199g00003 377 Pfam Kinase associated domain 1 334 376 IPR001772 -
Stsc91199g00003 377 FunFam Non-specific serine/threonine protein kinase 258 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91199g00003 Stsc-Chr91199 17928 22205 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91199g00003 2 135 CBL-interacting serine-threonine protein kinases AT4G24400 55.556 1.84e-45 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Stsc91199g00003 Pkinase 5.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91199g00003 K07198 - gmx:100796687 719.924