Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91196g00007 ATGATCACTGATGTACCTTCTTCTTCTTCTTCTTCTCCTCCTCATCCTCCTCCTCCTCCTTCTTCTTCCATCAAGCCCCGTAGATGGATCAACCATGTATTCCTCAGTTTCAGGGGTCAAGACACCAGAAAAGGCTTCACAGATCACCTTTATGCTGCACTTGAAAGAAGGGGTTGTATCAAAACTTTCAAGGATGATCATGACCTTGAGAGGGGGGAAGTCATATCTGAAGGGCTTATCAAGGGAATTCAAGAGTCCATGTTTGCACTCGTTGTCCTCTCACCAAACTATGCTTCCTCAATATGGTGCTTGGATGAGCTGCAAAACATTATTGAGTTCAGGGAAAAGTTTGGCCAAACGGTTTTTCCTATCTTCTATGGTGTAGAACCCTCTGATGTAAGGCATCAAAGAGGAACCTTTGGTGAAGCTTTTAGAAAACATGAAGAGAGGTTCAAAGAAGTGGTGGGGAAAGTCAAGAGATGGCGAGATGCATTGGAAGAAGTTGCAAGTTATTCTGGTTGGGACTCCAAAGATAATCATGAGGCAGCATTGATTGAAACAGTTGTTGATCACATACAAAAATTACTGATTCCTAAGTTGCCATCATGGGTAGGAAACCTCGTTGGTGTTGAATCAAGGGTGGAAAAGTTGAATTCACTCATCGGTATGCAGTTGGATGATGTTCGCTTTATAGCTATTTGGGGCATGGGAGGCATCGGCAAAACAACAATTGCCAGATTAATATATGAATCAATTGAAGAGCAGTTCAACTTTAGTTGCTTTCTTGCAAACATTAGAGAGGTGTCTGCAGCAAATGGCATAGTGCACATCCAAAGGGAACTTCTTTCTCATCTTTGTGTAAGAAGTAATTACTTTCATAATTTGTTTGATGGGGTAAAAATAATAGCAAACTCTTTGCGCAACAAAAAGGTCCTCCTTGTTCTTGACGATATAAGTGAAAGAAGCCAATTAGAGAACTTAGCCGGAAAGCAAGAATGGTTTGGTCCCGGTAGCAGAATAATTATCACAACTAGATATAAGCATCTGCTAGCAACTCATGGAGTGCATCAAACATTCGAGCTTGAAAGCTTAGTTCAGAAACAAGCCCTTTATTTATTCTGTCTGAAAGCTTTTAAACAAGGTCATCCCCAAAGCGGATATCAGAATTTGTGCAGTGAAGCAGTTGAATATACAAGAGGCCTTCCATTGGCACTTGAAATATTAGGTTCCCATCTTTATGGAAGAACTCCCGAGGCTTGGCATAGTTCTTTAAAACAAATAAGGAGTTCTCCACTACCGGAAATCCAAAATTCATTGAAATTGAGTTATGACAGCTTGCATAGCACAGAGAAAGACATGTTTTTGGATATTGCTTGTTTCTTTAAAGGCATGGACAAGGATGAAGTAATACAAGTGTTAGAAAATTGTGGTCATTTTCCGCAAATCGGAATCGAAATTTTGATTGAAAAATCTTTGGTCACTGTCGGTAAGGAGAATAATAAATTGGAAATGCATGATTTGCTTCAAGAGATGGGAAGGAATATAGTGTTTCAAGAATCTCCAAACGATCCAGGGAAACGTAGTAGATTGTGGTCACAAGATGACATCAACCGTGTGTTGACAGAAAATAAGGGAACTGAAGCGATTCAAGCAATAGTTCTTAATTTTATTCAACCATATGAAGCAAGATGGAGCCCTGAAGCTTTCTCCAAGACCAGCCAACTAAGGTTGCTAAAGATACATAATGTGCATCTTCCCCATGGACTCAATTTCCTTCCTTCTTCACTCAGAGTTCTTGACTGGCAAGGATGCCCTCTGAAAACTCTGCCACTTACTGATCAACTGGATATTGTTGACATCAAATTGTCTTACAGCAAAATTGAACAACTTTGGCATGGAACAAAGATTCTAGATAAGTTGAAGTCCATCAACTTGAGTTTTTCTGATAACCTAAACCAAACCCCTGACTTTGTGGAGGTTCCAAATCTTGAATTGTTAGTTCTTGAAGGTTGTACACGGCTAACCAAAATCCACTCATCTGTTATGCACCTCAAGAAACTTGTTCAATTGAACTTAAAAGGCTGCAAAAGGCTCAAAGCTCTTCCAGGTAAAATGGAGATGAGTTCATTGAAGGTTGTAAATCTTTCAGGTTGCTCTCAAATGAAAACCGTGCCCGACTTTGGGGATTGCATGCGGCATCTATCAATTCTTTGTTTGGATGGAACTGCTGTTACAGAGCTACCTTCATCACTAGAATGTCTGGTTGAACTTGTTCATTTGCATTTAAAGAATTGCAAGTATCTTTATTGCCTTCCGGGTACTATGCATAAGTTGAAGTCCCTCAAAGTTCTAAATGTTTCTGGTTGCTCGAAACTCGGTAGCTTGCCAGAGTGCCTACAGGAAATTAAGTGTTTGGAAGAACTTTACGCTAGCAATACATCCATCAAAGAACTACCTTTATTTTTGTGTTATCTAGAAAACCTCAAAGTAATATCATTTGCTGGTTGCAGAGGAACAGTATCTGAATCTGAGTTAAATTGTTTTCGACTTCCATCTGCTGTCTGCGGTCTATCCCTTTTGACAAGTTTAGATTTAAGTTATTGCAATCTAGTTGCTGAATCAATACCAGATGGTTTTTGCGGCTTATCTTTGCTGAGGGATTTAGATCTTTCTGGCAATAACTTTGTTCACCCACCAAGTGATATTTCGAAACATTCTACGCTTGAATATCTCTGTTTAAACTCATGCAAAGAGCTTCAGTTATTGCCTGAGCTTCCATTAAGCATAAAAAGAATAGATGCAAGCAACTGTGCCTCATTGGTAACTTCCACATTCCATCCATCAAGCAAATGCAGCATTTTTTCATCACCTGTACAATGGCACTTACCAAGAGAACAGAAGATCCTCCTTAAGGGGATGCACTTTCCAATAACCCCATTTGACATGCTTATCACTGGCAATGAAATTCCATCATGGTTTGCACCTCAGAAGTCCTCTTCCTTTGCAGAAATACCATTTCCTCATCCTTGTCCTCCAACTGAATGGGTGGGATATGCTGTGTGTTTCTTGCTGGTAGCAGATCCACCTTTGATTTGTCGTCATAAAATCACTTGTTACATGGGAACACAGACATCATTAGAGTCCGGCATACTGGAACCGGATGAAGATGATTGGAGAGCCGAGTCTTACGTGATCAGTAGGAATGTTCCTCTTATGGAGCCAAAACAGCCTCACCTTTACATTCTCTTTCTGTCCATTGGAGAATGCCTTGAAAGAATGCATACAGGTCATGGGTTTGGTTTGAGAAGTAATTGCTATTGCGATTCATTTAGAATAGTGCAGGCTGGGTGCCGTCTGGTGTGCAAGGAAGATGTTCAAGATATTTATGGAAATTGTTCCCATACTTCCTCTTAA 3414 0.401 MITDVPSSSSSSPPHPPPPPSSSIKPRRWINHVFLSFRGQDTRKGFTDHLYAALERRGCIKTFKDDHDLERGEVISEGLIKGIQESMFALVVLSPNYASSIWCLDELQNIIEFREKFGQTVFPIFYGVEPSDVRHQRGTFGEAFRKHEERFKEVVGKVKRWRDALEEVASYSGWDSKDNHEAALIETVVDHIQKLLIPKLPSWVGNLVGVESRVEKLNSLIGMQLDDVRFIAIWGMGGIGKTTIARLIYESIEEQFNFSCFLANIREVSAANGIVHIQRELLSHLCVRSNYFHNLFDGVKIIANSLRNKKVLLVLDDISERSQLENLAGKQEWFGPGSRIIITTRYKHLLATHGVHQTFELESLVQKQALYLFCLKAFKQGHPQSGYQNLCSEAVEYTRGLPLALEILGSHLYGRTPEAWHSSLKQIRSSPLPEIQNSLKLSYDSLHSTEKDMFLDIACFFKGMDKDEVIQVLENCGHFPQIGIEILIEKSLVTVGKENNKLEMHDLLQEMGRNIVFQESPNDPGKRSRLWSQDDINRVLTENKGTEAIQAIVLNFIQPYEARWSPEAFSKTSQLRLLKIHNVHLPHGLNFLPSSLRVLDWQGCPLKTLPLTDQLDIVDIKLSYSKIEQLWHGTKILDKLKSINLSFSDNLNQTPDFVEVPNLELLVLEGCTRLTKIHSSVMHLKKLVQLNLKGCKRLKALPGKMEMSSLKVVNLSGCSQMKTVPDFGDCMRHLSILCLDGTAVTELPSSLECLVELVHLHLKNCKYLYCLPGTMHKLKSLKVLNVSGCSKLGSLPECLQEIKCLEELYASNTSIKELPLFLCYLENLKVISFAGCRGTVSESELNCFRLPSAVCGLSLLTSLDLSYCNLVAESIPDGFCGLSLLRDLDLSGNNFVHPPSDISKHSTLEYLCLNSCKELQLLPELPLSIKRIDASNCASLVTSTFHPSSKCSIFSSPVQWHLPREQKILLKGMHFPITPFDMLITGNEIPSWFAPQKSSSFAEIPFPHPCPPTEWVGYAVCFLLVADPPLICRHKITCYMGTQTSLESGILEPDEDDWRAESYVISRNVPLMEPKQPHLYILFLSIGECLERMHTGHGFGLRSNCYCDSFRIVQAGCRLVCKEDVQDIYGNCSHTSS 1137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91196g00007 1137 ProSiteProfiles TIR domain profile. 29 196 IPR000157 GO:0007165
Stsc91196g00007 1137 Gene3D - 363 447 IPR042197 -
Stsc91196g00007 1137 Gene3D - 196 359 IPR027417 -
Stsc91196g00007 1137 Pfam TIR domain 32 194 IPR000157 GO:0007165
Stsc91196g00007 1137 Gene3D Ribonuclease Inhibitor 555 727 IPR032675 -
Stsc91196g00007 1137 Gene3D Ribonuclease Inhibitor 728 952 IPR032675 -
Stsc91196g00007 1137 MobiDBLite consensus disorder prediction 10 24 - -
Stsc91196g00007 1137 Pfam NB-ARC domain 225 448 IPR002182 GO:0043531
Stsc91196g00007 1137 SUPERFAMILY Toll/Interleukin receptor TIR domain 21 174 IPR035897 -
Stsc91196g00007 1137 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 195 457 IPR027417 -
Stsc91196g00007 1137 SUPERFAMILY L domain-like 505 930 - -
Stsc91196g00007 1137 Gene3D - 25 195 IPR035897 -
Stsc91196g00007 1137 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 32 726 IPR044974 GO:0006952
Stsc91196g00007 1137 PRINTS Disease resistance protein signature 398 412 - -
Stsc91196g00007 1137 PRINTS Disease resistance protein signature 776 792 - -
Stsc91196g00007 1137 PRINTS Disease resistance protein signature 305 319 - -
Stsc91196g00007 1137 PRINTS Disease resistance protein signature 230 245 - -
Stsc91196g00007 1137 SMART LRR_typ_2 731 754 IPR003591 -
Stsc91196g00007 1137 SMART LRR_typ_2 857 881 IPR003591 -
Stsc91196g00007 1137 SMART LRR_typ_2 882 905 IPR003591 -
Stsc91196g00007 1137 SMART till_3 30 171 IPR000157 GO:0007165
Stsc91196g00007 1137 MobiDBLite consensus disorder prediction 1 25 - -
Stsc91196g00007 1137 FunFam Disease resistance protein (TIR-NBS-LRR class) 27 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91196g00007 Stsc-Chr91196 25953 30418 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91196g00007 38 837 WRKY Transcription Factor Family AT4G12020 32.811 1.46e-118 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91196g00007 - - ahf:112733264 1823.14