Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91195g00006 ATGACGATTGAGGAGCCAATGCACAAGCAGATAGCAAGAGAGCTGAAAATTAATCAGTCAGCACAATGTCCATATGTTGTTGTTTACTACCAATCATTCTACAATAATGGGGTCATATCAATCATCTTAGAGTACATGGATGGAGGGTCCTTAGAAGATTTTCTTAGCATAGTCAAAACAATTCCAGAGCCATATCTTGCCGCCATCTGCAAGCAGGTGCTGAAGGGTCTAATTTATCTTCACCATGAAAAACATATTATCCATAGGGACTTAAAGCCTTCCAACTTGTTGATAAATCATAGAGGAGAAGTAAAGATTACTGATTTTGGTGTGAGCGCAATCATGGAAACTACATCCGGTCTAGCTAATACTTTTATCGGCACATACATCTACATGTCTCCAGAGAGAATTACTGGAAACCCTGGTGGCTACAACTACAGAAGTGATATATGGAGTTTGGGACTGATATTGCTCAAGTGTGCTACAGGGAAGTTTCCATATACACCGCCTGATAAAAAAGAAGGATGGGAAAATATCTACCAGCTTATTGAAGTCGTTGTTGAAAAACCTCCGCCGAGTGCTCCATCTGATCAGTTTTCTCTGGAGTTTTGTTCATTCATCTCTGCATGTTTACAGAAAAATCCAAAGGATAGAAAGTCAGCTCCAGACCTTGTGGCATCCATTTATCAGCATGTATGA 699 0.4006 MTIEEPMHKQIARELKINQSAQCPYVVVYYQSFYNNGVISIILEYMDGGSLEDFLSIVKTIPEPYLAAICKQVLKGLIYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMETTSGLANTFIGTYIYMSPERITGNPGGYNYRSDIWSLGLILLKCATGKFPYTPPDKKEGWENIYQLIEVVVEKPPPSAPSDQFSLEFCSFISACLQKNPKDRKSAPDLVASIYQHV 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91195g00006 232 ProSiteProfiles Protein kinase domain profile. 1 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91195g00006 232 CDD PKc_MAPKK_plant_like 1 224 - -
Stsc91195g00006 232 Pfam Protein kinase domain 6 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91195g00006 232 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 3 226 - -
Stsc91195g00006 232 SMART serkin_6 1 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91195g00006 232 Gene3D Phosphorylase Kinase; domain 1 1 47 - -
Stsc91195g00006 232 Gene3D Transferase(Phosphotransferase) domain 1 48 231 - -
Stsc91195g00006 232 SUPERFAMILY Protein kinase-like (PK-like) 6 228 IPR011009 -
Stsc91195g00006 232 ProSitePatterns Serine/Threonine protein kinases active-site signature. 86 98 IPR008271 GO:0004672|GO:0006468
Stsc91195g00006 232 PIRSF ILK 3 228 - -
Stsc91195g00006 232 Coils Coil 232 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91195g00006 Stsc-Chr91195 18012 21291 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91195g00006 1 225 MAP Kinase Kinase Gene Family AT4G29810 66.667 9.39e-115 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Stsc91195g00006 Pkinase 1.3e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91195g00006 K20603 - gmx:100789241 386.341