Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91192g00001 ATGGAAATTCCAATGGAGGAGAAACCATTCCCTGCATGGTCATGGTCTGTTGAGCAGTGTTTGAAAGAGTATGGTGTGAAATTTGAAAAGGGTTTGAGTACTTTTGAGGTTCGGAAGAGGCGCAAAAAGTATGGTTGGAAATTGGAACGAGTTAGCAAAAGAGAAAGGGAAGCCATTGTGGCAATTGGTAGTAGAACAATTCGAGACATGCTGCGGGCAAAGTTCGGAGCGGAAGTGGCTAAAGAGAATGCGAGGAACGAAAAGATCGTGAAGGAAAGCTTGAAGGCCAAATCCAAAGCCTATGCGTATGCACCAAAGGAGTCTGTGCGTACGCATTGCCATGCATTGGGCGTCACGTCATAG 363 0.4601 MEIPMEEKPFPAWSWSVEQCLKEYGVKFEKGLSTFEVRKRRKKYGWKLERVSKREREAIVAIGSRTIRDMLRAKFGAEVAKENARNEKIVKESLKAKSKAYAYAPKESVRTHCHALGVTS 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91192g00001 120 Coils Coil 77 97 - -
Stsc91192g00001 120 Pfam Cation transporter/ATPase, N-terminus 13 46 IPR004014 -
Stsc91192g00001 120 SUPERFAMILY Calcium ATPase, transmembrane domain M 11 46 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91192g00001 Stsc-Chr91192 2025 3249 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91192g00001 6 47 Primary Pumps ATPases(2) AT4G00900 61.905 6.84e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91192g00001 K01537 - gmx:100800498 88.5817