Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91190g00005 ATGGACAACCTTCCATACTACATGAAAATATGCTTCCTTGCACTAAATAACTTTCTTAATGAAGTAGCTTTCGAAAGCCTACGAGATAATGAGGTTTATATTGCTCCTTTCCTTAGAAAGTCGTGGGCAGATTTATGTAAGGCATATTTTGTTGAGGCAAAGTGGTACCATTGTGGTTATATACCAACTCTTGAAGAGTACATGGAGAATGGTTGGAGATCTGCAAGCTCACATGTTATTTTTCTTCATGCTTATTTCACAATTCCGAATGCATTCAAAAAGGAGCAATTGGATTCCTTAAGTGAATATCCCAACATAATTCGTCTTACATCATTGTTTTGCCGCCTTGTTAATGACATTGGTACATATAAGCGTGAGAAAGAGACTGGAGATGCTCCTTCATCAATTGAATGCTACATGAACGAAAGTGGAGCTTCTGAGGCAGAAGCATGTGAGCATGTTAGATCAATTATGAATACACTGTGGAAGAAGATAAACAAAGAAGCTCATCATTCTTGTCTCTCTCAAGATTTCATAGACACAACTTTAGGCCTCACAAGAATGGCATTAATCATGTATGGCCATGATGATTACCATACTTTTCAAGATTCTGAAGCCAAGAATGCGGTTCCTATTACAACCGCCGCTAAATGCCCGATAACGCAACTTTTTCTTCCTCATTTTTCTACAAACACAAACCCTAACACAACTCCACCGCCTCACTCACCCCCACCTAGCATCGTAGCTGCTATTGTCGTCACCCCCATCGCCGCCGAAAATCGTCGTGAAGGCCAACTGGAGAGCCAGCTTCACCCACATTACATTGACGCGAGGTTGGGAAGGAGAAGGAGGGAGTTCTGCTGTGTTGCTTCCCGCCGAGCCCGCCGCCGTCGTTTTGCACAGCTGAGGAGATTAATTTCAACCCCATCTGATCTGCTGTGTGAAGAAGAACCCCCATTCTTAAGAAATCCTCCCACAACCGCTTTTTGTCGACCTCCGTTTTTGAATTCTTTCTCAACTAGCGCCACCTTGATTAGGATCTGCTTTGGATTGAGGTTTAGTAGTGCAAGAGCTAGAATCAGAGAGGTTCACTTTTTACCTTTCAATCCTGTGGACAAGAGAGCTGCTCTGACTTACATTGATGCTGATGGAAATTGGCACCGTTCAAGTAAAGGTACCCCAGAGCAGAGGCCCATTGGCAGGCCCAAGGTCCACTCAAGGAAGAGGGATTCGCTGGAAGTGCTGACAGAAGGTGACAAGTTGAAGAAGAGTTTTAAGGTCACATGCAGCAAGTGTGGTGAGAAAGGCCACAATTACAAAACATGCAAGGGTGCTCCAGCCAATCCTGCCCCAAAAACTAACTCACGAAAGAAGAGGAGGGGAGAATCCTCCACTCAAGCTGCGTGTGATGTTCAGGTTTCTCAATCTGAACCGCAACCTGAGGGTGATGATGGTGGAGGTGATTCCCAGCAAGGAAATTCTGCTGCCCAGGTCCAACATGAGGTGCCCATTGCAGAAGGACCCTCTAAGAGGTTTAGGGCTAAGCAGCCAGTTCGGCGACGCCCCACAAAGGAGCTCCTCCCAGAGCAGAATTTGCCTAAGCAACCTGACTCCATCGACTCATCCCAGCAAGTTGCTCAGCAAGCACCAAGAAGCCCTGTGGCAGGCCCTTCGAAGGAGACTCTCGCTGCAGCAGGACCATCAGCTCAAAAAATTTGGCAATTCATGCCAACTTCTGGTCTGAACCCGAAGTAG 1755 0.461 MDNLPYYMKICFLALNNFLNEVAFESLRDNEVYIAPFLRKSWADLCKAYFVEAKWYHCGYIPTLEEYMENGWRSASSHVIFLHAYFTIPNAFKKEQLDSLSEYPNIIRLTSLFCRLVNDIGTYKREKETGDAPSSIECYMNESGASEAEACEHVRSIMNTLWKKINKEAHHSCLSQDFIDTTLGLTRMALIMYGHDDYHTFQDSEAKNAVPITTAAKCPITQLFLPHFSTNTNPNTTPPPHSPPPSIVAAIVVTPIAAENRREGQLESQLHPHYIDARLGRRRREFCCVASRRARRRRFAQLRRLISTPSDLLCEEEPPFLRNPPTTAFCRPPFLNSFSTSATLIRICFGLRFSSARARIREVHFLPFNPVDKRAALTYIDADGNWHRSSKGTPEQRPIGRPKVHSRKRDSLEVLTEGDKLKKSFKVTCSKCGEKGHNYKTCKGAPANPAPKTNSRKKRRGESSTQAACDVQVSQSEPQPEGDDGGGDSQQGNSAAQVQHEVPIAEGPSKRFRAKQPVRRRPTKELLPEQNLPKQPDSIDSSQQVAQQAPRSPVAGPSKETLAAAGPSAQKIWQFMPTSGLNPK 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91190g00005 584 MobiDBLite consensus disorder prediction 384 412 - -
Stsc91190g00005 584 Pfam Terpene synthase family, metal binding domain 1 164 IPR005630 GO:0000287|GO:0010333|GO:0016829
Stsc91190g00005 584 MobiDBLite consensus disorder prediction 438 584 - -
Stsc91190g00005 584 Gene3D - 342 437 IPR023299 GO:0000166
Stsc91190g00005 584 ProSiteProfiles Zinc finger CCHC-type profile. 429 443 IPR001878 GO:0003676|GO:0008270
Stsc91190g00005 584 MobiDBLite consensus disorder prediction 465 479 - -
Stsc91190g00005 584 MobiDBLite consensus disorder prediction 534 551 - -
Stsc91190g00005 584 Gene3D Farnesyl Diphosphate Synthase 1 225 IPR008949 -
Stsc91190g00005 584 SUPERFAMILY Terpenoid synthases 1 210 IPR008949 -
Stsc91190g00005 584 PANTHER OS04G0344100 PROTEIN-RELATED 1 198 - -
Stsc91190g00005 584 MobiDBLite consensus disorder prediction 398 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91190g00005 Stsc-Chr91190 19994 25295 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91190g00005 356 406 Primary Pumps ATPases AT2G18960 72.414 1.58e-17 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91190g00005 - - ahf:112701625 388.267