Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91184g00001 ATGGCAACAACAACAACACCCTCGTCAGTGCGCGTTAAAGAAGCTCTGCTCGTCACGCCATCCGACCCCACACCAACTGGGATTCTCCATCTCTCCGCAATCGACTCTCAGCTTTTTCTTCGCTTCACCGTTGAATACCTCTTTGTCTACAGACCACCCTCATCCCTCCACCAGGCTACCGTGGTGACACGTGTCAAGTCCGCATTGGCAAGAGCGCTCGTTCCGTACTATCCCTTCTCCGGCAGAGTACGGCCCAGGGCTGACGTCACCGGCGGGCTTGAGGTTGTGTGCCGCGGACAAGGCGCGCTTTTCATCGAGGCTTTCTCTGATGTCTACACTGCTAAAGATTTCGACAAGGCTCCGAAAACGGTTACGCAATGGAGGAAGCTCTTGTCGCTTTACGTTCCCGACGTTCTCAAAGGATCGCCGCCGCTCGTCGTTCAGCTCACGTGGCTTGCCGACGGAGCCGCCGCGGTTGGCGTCGGAATCAACCACGCACTCTGCGATGGCATAGGAAGCGCTGAGTTTCTTAACTACTTCGCTAAATTAGCTTCCGGCCCACGAGATTTTGATCCCAAGCCCAGGCCCGTCTGGGATCGCCACATCATGAACCCGCCGCCGTCCAAGAAAAACGACCGGGCTAAGGGTAACAGTTACAGTTACAGCCACAGCCACGCTGAGTTTGCACGGGTGCCCGATCTCTGCGGGTTTATGAACAAGGTAACCACCGGGCTCAGGCCCACCTCCATTGTTTTCAACAAGAGGCGGATAAACGAGCTAAAGGGAATAGCCCGTTACTCGAGTGAGTCGTCATCATCATCGCACACGTCTTTTGAGGTGATAGCGGCCCACGTGTGGAGGAGCTGGGCCCGGGCATTGGGCTTTCCACCAAACCAGCAACTAAAGATTCTGTTTAGCATTAACGTGCGGAACCGGGTGAAGCCGAACCTTCCAGAGGGGTATTATGGGAACGCGTTCGTTCTCGGGTGCGCACAGAGCAGTGCAAAGGACCTTGCAGAGAAAGGAATCGGGTACGGGTCGGGCCTTGTGAAACGGGCCAAGGAGAGGGTGGATGGAGAGTACGTGAGGAGGGTGAGTGAGTTAGTTTCCGAGTGGAGGGCGAGTCCTGACCCGGTTGGTGTGCTAATAGTTTCTCAGTGGTCTCGTTTGGGCCTTGATAGGGTTGAGTTTATGGGCCGGCCCATTCATGTTGGGCCCATATGCTGGGATAGATACTGCTTGTTTCTTCCGGTGAGGGATGAGGCGGAGAGTGTTAGGGTCGCCGTGGCTGTCCCTGCCGCCGCCTTTGACAGTTACCACCGCTTTATTGGAGAATCCAATTTATGA 1347 0.5553 MATTTTPSSVRVKEALLVTPSDPTPTGILHLSAIDSQLFLRFTVEYLFVYRPPSSLHQATVVTRVKSALARALVPYYPFSGRVRPRADVTGGLEVVCRGQGALFIEAFSDVYTAKDFDKAPKTVTQWRKLLSLYVPDVLKGSPPLVVQLTWLADGAAAVGVGINHALCDGIGSAEFLNYFAKLASGPRDFDPKPRPVWDRHIMNPPPSKKNDRAKGNSYSYSHSHAEFARVPDLCGFMNKVTTGLRPTSIVFNKRRINELKGIARYSSESSSSSHTSFEVIAAHVWRSWARALGFPPNQQLKILFSINVRNRVKPNLPEGYYGNAFVLGCAQSSAKDLAEKGIGYGSGLVKRAKERVDGEYVRRVSELVSEWRASPDPVGVLIVSQWSRLGLDRVEFMGRPIHVGPICWDRYCLFLPVRDEAESVRVAVAVPAAAFDSYHRFIGESNL 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91184g00001 448 MobiDBLite consensus disorder prediction 196 218 - -
Stsc91184g00001 448 Gene3D - 5 220 IPR023213 -
Stsc91184g00001 448 Gene3D - 239 442 IPR023213 -
Stsc91184g00001 448 PANTHER ACYL TRANSFERASE 4 9 433 - -
Stsc91184g00001 448 Pfam Transferase family 9 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91184g00001 Stsc-Chr91184 9794 11140 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91184g00001 10 445 Monolignol Biosynthesis Gene Families AT5G48930 28.166 3.06e-46 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91184g00001 - - gmx:100803812 602.823