Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91178g00009 ATGCTTACATGCATAGCACGTCCCAAGAAATCGTGCACGGGCAGCAACCATGAGTCTCTGAGTAAGCCTGATGATTCCGATCCCAACAACAAAAACCAGTCCATGAAATCCCTCACTTCCCAGATAAAGGACATGGCGCTGAAGGCGTCGGGAGCGTACAAGCATTGCGCGCCGTGCACGGTGGCGGGACCCGCGGGGAGACTGATGAGGAGCAACGGGGAGTCATCGCCGGAGACGGACTCAGACAGGTTCAGGTGGTCGTACCGGAGGACAGGGAGCTCGACGAGAGGTTGGGGGAAGGAGATGGAGGCGAGGCTGAAGGGGATATCATCGTCGAGTGGGGAAGGAACGCCGAACTCCGCCAGCGGACGGCGGTTGGATCCGGTTGTTCTTTTTGTAGAAGAAAAGGAACCAAAGGAGTGGGTGGCGAACGTCGAGCCCGGCGTTTTGATCACCTTCGTATCGCTTCCACGTGGCGGCAACGATCTCAAACGCATTCGTTTCAGTCGCGAGATGTTTAACAAATGGCAAGCTCAAAGGTGGTGGGCGGAGAATTATGACAGGGTCATGGAACTTTACAATGTTCAAAGGCTTAACCGTCAAGCATTCCCTCTTCCAACGCCACCAAAATCCGAAGATGAGAACTCAAAGCTTGAATCAGCAGAAGAGAGCCCAGTGACACCACCACTAAGCAGAGAGAGATTACCTCGCAATTTGCACCGTCCAACAGGTATGGGAGTGGGATACTCTTCCTCGGATTCCTTCGATCATCAATCCATGCAATCCCGCAAGTTGCATGACTTAAATGGTGTTAACTCAACTCCAAAGGTCTCAACCATTAGTGCTGCCAAGACCGAGATATCATCAGTGGATGCTTCAATCAGAAGTAGCTCATCTAGAGAGGCTGATCGATCCGGTGATCTATCAATCAGCAATGCTAGTGATTTGGACTCTGAATGGGTTGAGCAAGATGAACCTGGGGTTTATATTACCATCAGAGCACTGCCAGGTGGCAAAAGGGAGCTCAGACGAGTCAGATTCAGCCGAGAAAAATTTGGGGAGGTGCATGCTAGATTATGGTGGGAGGAGAATCGTGGCAGAATACATGAACAATACTTGTGA 1122 0.5134 MLTCIARPKKSCTGSNHESLSKPDDSDPNNKNQSMKSLTSQIKDMALKASGAYKHCAPCTVAGPAGRLMRSNGESSPETDSDRFRWSYRRTGSSTRGWGKEMEARLKGISSSSGEGTPNSASGRRLDPVVLFVEEKEPKEWVANVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWAENYDRVMELYNVQRLNRQAFPLPTPPKSEDENSKLESAEESPVTPPLSRERLPRNLHRPTGMGVGYSSSDSFDHQSMQSRKLHDLNGVNSTPKVSTISAAKTEISSVDASIRSSSSREADRSGDLSISNASDLDSEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEVHARLWWEENRGRIHEQYL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91178g00009 373 MobiDBLite consensus disorder prediction 1 38 - -
Stsc91178g00009 373 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 373 IPR044532 -
Stsc91178g00009 373 MobiDBLite consensus disorder prediction 202 260 - -
Stsc91178g00009 373 MobiDBLite consensus disorder prediction 245 260 - -
Stsc91178g00009 373 ProSiteProfiles BRX domain profile. 139 194 IPR013591 -
Stsc91178g00009 373 Pfam Transcription factor BRX N-terminal domain 28 59 IPR027988 -
Stsc91178g00009 373 MobiDBLite consensus disorder prediction 291 311 - -
Stsc91178g00009 373 Pfam Transcription factor regulating root and shoot growth via Pin3 318 372 IPR013591 -
Stsc91178g00009 373 Pfam Transcription factor regulating root and shoot growth via Pin3 139 193 IPR013591 -
Stsc91178g00009 373 MobiDBLite consensus disorder prediction 64 83 - -
Stsc91178g00009 373 ProSiteProfiles BRX domain profile. 318 373 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91178g00009 Stsc-Chr91178 25264 29078 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91178g00009 1 373 Major Intrinsic Protein MIP AT1G31880 44.501 3.26e-87 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91178g00009 - - gmx:100794109 601.668