Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91178g00007 ATGGCGCTGAAGGCGTCGGGAGCGTACAAGCATTGCGCGCCGTGCACGGTGGCGGGACCCGCGGGGAGACTGATGAGGAGCAACGGGGAGTCATCGCCGGAGACGGACTCAGACAGGTTCAGGTGGTCGTACCGGAGGACAGGGAGCTCGACGAGAGGTTGGGGGAAGGAGATGGAGGCGAGGCTGAAGGGGATATCATCGTCGAGTGGGGAAGGAACGCCGAACTCCGCCAGCGGACGGCGGTTGGATCCGGTTGTTCTTTTTGTAGAAGAAAAGGAACCAAAGGAGTGGGTGGCGAACGTCGAGCCCGGCGTTTTGATCACCTTCGTATCGCTTCCACGTGGCGGCAACGATCTCAAACGCATTCGTTTCAGTCGCGAGATGTTTAACAAATGGCAAGCTCAAAGGTGGTGGGCGGAGAATTATGACAGGGTCATGGAACTTTACAATGTTCAAAGGCTTAACCGTCAAGCATTCCCTCTTCCAACGCCACCAAAATCCGAAGATGAGAACTCAAAGCTTGAATCAGCAGAAGAGAGCCCAGTGACACCACCACTAAGCAGAGAGAGATTACCTCGCAATTTGCACCGTCCAACAGGTATGGGAGTGGGATACTCTTCCTCGGATTCCTTCGATCATCAATCCATGCAATCCCGCAAGTTGCATGACTTAAATGGTGTTAACTCAACTCCAAAGGTCTCAACCATTAGTGCTGCCAAGACCGAGATATCATCAGTGGATGCTTCAATCAGAAGTAGCTCATCTAGAGAGGCTGATCGATCCGGTGATCTATCAATCAGCAATGCTAGTGATTTGGACTCTGAATGGGTTGAGCAAGATGAACCTGGGGTTTATATTACCATCAGAGCACTGCCAGGTGGCAAAAGGGAGCTCAGACGAGTCAGATTCAGCCGAGAAAAATTTGGGGAGGTGCATGCTAGATTATGGTGGGAGGAGAATCGTGGCAGAATACATGAACAATACTTGTGA 990 0.5182 MALKASGAYKHCAPCTVAGPAGRLMRSNGESSPETDSDRFRWSYRRTGSSTRGWGKEMEARLKGISSSSGEGTPNSASGRRLDPVVLFVEEKEPKEWVANVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWAENYDRVMELYNVQRLNRQAFPLPTPPKSEDENSKLESAEESPVTPPLSRERLPRNLHRPTGMGVGYSSSDSFDHQSMQSRKLHDLNGVNSTPKVSTISAAKTEISSVDASIRSSSSREADRSGDLSISNASDLDSEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEVHARLWWEENRGRIHEQYL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91178g00007 329 MobiDBLite consensus disorder prediction 20 42 - -
Stsc91178g00007 329 MobiDBLite consensus disorder prediction 246 267 - -
Stsc91178g00007 329 Pfam Transcription factor regulating root and shoot growth via Pin3 274 328 IPR013591 -
Stsc91178g00007 329 Pfam Transcription factor regulating root and shoot growth via Pin3 95 149 IPR013591 -
Stsc91178g00007 329 ProSiteProfiles BRX domain profile. 95 150 IPR013591 -
Stsc91178g00007 329 MobiDBLite consensus disorder prediction 158 216 - -
Stsc91178g00007 329 ProSiteProfiles BRX domain profile. 274 329 IPR013591 -
Stsc91178g00007 329 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 329 IPR044532 -
Stsc91178g00007 329 MobiDBLite consensus disorder prediction 201 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91178g00007 Stsc-Chr91178 25264 29078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91178g00007 1 329 Major Intrinsic Protein MIP AT1G31880 45.245 8.95e-80 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91178g00007 - - gmx:100794109 559.296