Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91174g00004 ATGAAGAACTCTGCCTCAGATCGCAGTTTCTACCTTGAGAGCGACGACGAAGATGAGGAGAAGGATTTGAACAATGTAGATCAAGGAAACGATTCAGACGATTCCAATGAATGGAGTGAGAACGATCCAACGAGAAAACCCAGTTCATACAGCATGGCATGGCCTCAAAGTTACAGGCAATCCATTGATCTGTTAGGTAGTGTACCATCACCAAATATTGGATTTTTGGGCACTACCTCCCTATCAAGATTAGGAAGTTCTTTTATCGTTCCACCTTTGGTAAAGAGACAACCCCCAGTTCCAGATACAACTCCATCAGCAAAGAAACCTCTGCTACAACCAACAGAAATTGATGAACAGCGCCGTAGCTCCCGTTTTCTGTTGAGGAGGGGTTCTACTAGGAAGGAGGTTTCCAAGGTTGGTCATGAAGTTCACTTTTCAGGCCAATGCACTTTTGGTCAAGCTGTGCTTAATGGCATAAATGCTCTTTGTGGTGTTGGAATCCTCTCTACCCCTTATGCCCTTAGAGAAGGTGGATGGGTTGCACTTTCAGTCTTGTTCATATTTTCAATTTTCAGCTTCTATACCGGGTTGCTGTTACGTCACTGCTTGGATAGTGAACCTGGGCTTGAGACATACCCTGACATTGGCCAAGCAGCTTTTGGTTCTAGTGGACGTATTTTCATTTCAGTAATATTATACACGGAATTATATGCTTGTTGCATAGAGTATATAATTTTGGAGAGCGATAACTTATCTTCATTATTTCCAAATGCGCACCTAAGTTTGGGTGGACTTGACTTGAATCCTCATGTTCTATTTGCAATTGTGACCACCTTGGCTATTCTTCCTACGGTTTATCTTCGTGATTTGCGCATTCTGAGTTACCTCTCAGCATGTGGAGTTCTTGCAACAATTTTAGTGGTTCTCTGCCTTTTTTGGGTTGGCCTAGTAGACAACGTTGGCATTCACAGCAAAGGAACAACAATCAATCTCACAACTTTTCCAGTTGCTATGGGTCTCTATGGTTACTGCTACTCAGGACATGCTGTGTTCCCGAACTTGTATACAGCCATGGCAAACAGAAATCAGTTCCCTGGAGTGCTTTTAGTATGTTTTGCACTATGTACAGCTATGTATGCTGCAGTAGCTGTTATGGGATACACAATGTTTGGAGAATATACGCTGTCTCAGTACACTCTTAACATGCCTCAAGGCTTAGTTGCCACCAAACTTGCTGTATGGACAACGGTGGTGAATCCGTTTACCAAATATCCTTTTTTTGCATCACATGATCACAGTAACATAGCATGCATTTAG 1320 0.4258 MKNSASDRSFYLESDDEDEEKDLNNVDQGNDSDDSNEWSENDPTRKPSSYSMAWPQSYRQSIDLLGSVPSPNIGFLGTTSLSRLGSSFIVPPLVKRQPPVPDTTPSAKKPLLQPTEIDEQRRSSRFLLRRGSTRKEVSKVGHEVHFSGQCTFGQAVLNGINALCGVGILSTPYALREGGWVALSVLFIFSIFSFYTGLLLRHCLDSEPGLETYPDIGQAAFGSSGRIFISVILYTELYACCIEYIILESDNLSSLFPNAHLSLGGLDLNPHVLFAIVTTLAILPTVYLRDLRILSYLSACGVLATILVVLCLFWVGLVDNVGIHSKGTTINLTTFPVAMGLYGYCYSGHAVFPNLYTAMANRNQFPGVLLVCFALCTAMYAAVAVMGYTMFGEYTLSQYTLNMPQGLVATKLAVWTTVVNPFTKYPFFASHDHSNIACI 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91174g00004 439 Pfam Transmembrane amino acid transporter protein 150 429 IPR013057 -
Stsc91174g00004 439 MobiDBLite consensus disorder prediction 1 52 - -
Stsc91174g00004 439 MobiDBLite consensus disorder prediction 95 115 - -
Stsc91174g00004 439 PANTHER OS05G0424000 PROTEIN-RELATED 158 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91174g00004 Stsc-Chr91174 12796 23149 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91174g00004 1 425 Amino Acid or Auxin Permease AAAP Family AT2G39130 64.840 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91174g00004 K15015 - gmx:100781123 598.971