Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91173g00001 ATGACTTCCATCAACGCCGACGATACACAAACTGCAACTTCTTACCGTGTTCTTGCGGATCGGTGTCGGACACTGGAGGAGGACCAAGCCAAGCTCAGGGAACAGTTCCACCAACTCCTTCACCAGAAGGAAGCGGAGCAAGAAGAAGAAGAAGAAGAAGCAGTGGTTTCAGATTCAACGGTGCGTTTTCTTTCGAGGAACTTCTTCTCCGGTGGTCCGTACGCCACCGTGTTGAAATGCATGGGACACGCCGTTCATGTCTATAAAGCTTCCTCCGGTGAGATCATATATTGGAATCGTTCCGCAGAAACACTGTATGGATGGAAAGACTATGAAATCATTGGGCAAAGAGTTTCTAAGTTCCTTGTTACCGAAGAGTATTATGCATCTCTGCAGAATATTCTAGAAAGGTTGATCACAGGAGTACCATGGTCTGGAAAGTTTCCTTTCAAGAAGAGATCTGGTGAAGTATTTATGGCAATGGTGACAAAAACTCCTCTTTATGAGGATGGTGAGCTTGTTGGTATTATCACTGTTTCCAGTGATGCCGCTGTATTTAACTCAATGGATTCAGAAAATAGAAGAACTTACCAACCTGGTAACAATGGCAAAGCTGGAGGACAGAGGATAAATTTCAAAAGAATTCAGTGGCCTCCACGACCGTTAATTGGACCAGTTCCGAAGATTGCATCATCTGTTTCTAATCTGGCATCAAAGATTCTCCTTAACCGGCATCCAGATGATGCATTCTCCAGGAATACTACAACAGATGAAGATGAAGAAAAACCAGAAAAGAACAGTATTCATGAAACAGAACAAAATTCTAGTCATCAGAGAGGTGAACGCATAACTCTTAGGGAGGCATCTGAGAAGGTTAAGTCTACTATTGCAGCTAGAGTCCTAGCCAAGCTACAAACAAGGGGAAGTGAAAAATGTGGGAAGGATGATGGAAGCAATAAAAATAATTGCACAAGTGATTGTTCAAAAAGCAATAGAGTGAATAATGAGGTTGATCCTTCTGGAGGCTCAGTAGCTTTAACTCCACACAACGTTGTTGCTAATGGAGAGGATAGAGAAGACCCATTATTAAGATTACACTGCCATTTTAATCCAAAGAAAATGGAACAAGAAGCTATAAAAGTGGTGATAGAAGATGAAATGAAAAAGCAGCGAGAAGGAGTACAACTGTCAAGTACACGAGAAAGCACAGGCAGTAATGGAAGCTCATCAAGTAAAGGTGATAGTGAGTCAAACTCTGTTGTGGAGGCTGAAATCCATTGGGAAGACCTTCAACTAAGAGAGGAGATTGGTCAAGGGTCTTATGCAGTTGTTTATCACGGAATATGGAATGGATCGGATGTTGCTGTCAAGGTTTACTTCGGAAATGGATACACAGAGGAGACATTACATGATTACAAAAAAGAGATTGATATAATGAAGAGACTCAGACACCCTAATGTATTACTTTTCATGGGAGCAGTATATTCACAGGAAAGGCTTGCCATTGTGACAGAACTGTTACCTAGGGGAAGCCTTTTCAAAATTCTTCACAAGACCAATCAGTCACTAGACATCAGAAGGCTTTTAAGAATGGCTCTTGATGTTACTAAAGGTATGAATTATCTTCATCATAGAAATCCACCCATTGTGCATAGAGACCTAAAGTCTTCTAATCTGCTTGTTGATAAAAACTGGACTGTCAAGGTTGGAGACTTTGGTTTGTCAAGGTTGAAGGATGCAACTTTATTGACTTCAAAGTCTGGAAGAGGCACTCCTCAATGGATGGCCCCTGAAGTCCTACGAAATGAGCCTTCCAATGAAAAGTCGGATGTGTACAGTTTTGGTGTGATCCTATGGGAACTAATGACTCAATCCATTCCTTGGGAAAATTTGAATTCCTTACAGGTGGTTGGAGTAGTAGGATTTATGGATAGAAGACTTGATCTTCCAGAAGGGCTTGATCCCCAAGTGGCATCGGTCATTCGCGACTGCTGGAAAAGCGACCCAGAACAACGCCCATCGTTTCAAGAGCTGATAAAGAGAATGATGTTTCTTGTCAACAAAGTAAACGCAGCATCGACTAGGAGAATTTCAGAATCATAA 2103 0.4175 MTSINADDTQTATSYRVLADRCRTLEEDQAKLREQFHQLLHQKEAEQEEEEEEAVVSDSTVRFLSRNFFSGGPYATVLKCMGHAVHVYKASSGEIIYWNRSAETLYGWKDYEIIGQRVSKFLVTEEYYASLQNILERLITGVPWSGKFPFKKRSGEVFMAMVTKTPLYEDGELVGIITVSSDAAVFNSMDSENRRTYQPGNNGKAGGQRINFKRIQWPPRPLIGPVPKIASSVSNLASKILLNRHPDDAFSRNTTTDEDEEKPEKNSIHETEQNSSHQRGERITLREASEKVKSTIAARVLAKLQTRGSEKCGKDDGSNKNNCTSDCSKSNRVNNEVDPSGGSVALTPHNVVANGEDREDPLLRLHCHFNPKKMEQEAIKVVIEDEMKKQREGVQLSSTRESTGSNGSSSSKGDSESNSVVEAEIHWEDLQLREEIGQGSYAVVYHGIWNGSDVAVKVYFGNGYTEETLHDYKKEIDIMKRLRHPNVLLFMGAVYSQERLAIVTELLPRGSLFKILHKTNQSLDIRRLLRMALDVTKGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSRLKDATLLTSKSGRGTPQWMAPEVLRNEPSNEKSDVYSFGVILWELMTQSIPWENLNSLQVVGVVGFMDRRLDLPEGLDPQVASVIRDCWKSDPEQRPSFQELIKRMMFLVNKVNAASTRRISES 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91173g00001 700 MobiDBLite consensus disorder prediction 305 347 - -
Stsc91173g00001 700 SUPERFAMILY Protein kinase-like (PK-like) 419 688 IPR011009 -
Stsc91173g00001 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 549 561 IPR008271 GO:0004672|GO:0006468
Stsc91173g00001 700 CDD STKc_MAP3K-like 436 682 - -
Stsc91173g00001 700 ProSiteProfiles PAS repeat profile. 92 142 IPR000014 -
Stsc91173g00001 700 CDD PAS 93 182 IPR000014 -
Stsc91173g00001 700 NCBIfam PAS domain S-box protein 87 182 IPR000014 -
Stsc91173g00001 700 Gene3D Phosphorylase Kinase; domain 1 423 507 - -
Stsc91173g00001 700 SMART serkin_6 430 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91173g00001 700 Coils Coil 15 53 - -
Stsc91173g00001 700 ProSiteProfiles Protein kinase domain profile. 430 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91173g00001 700 PRINTS Tyrosine kinase catalytic domain signature 590 600 IPR001245 GO:0004672|GO:0006468
Stsc91173g00001 700 PRINTS Tyrosine kinase catalytic domain signature 504 517 IPR001245 GO:0004672|GO:0006468
Stsc91173g00001 700 PRINTS Tyrosine kinase catalytic domain signature 609 631 IPR001245 GO:0004672|GO:0006468
Stsc91173g00001 700 PRINTS Tyrosine kinase catalytic domain signature 543 561 IPR001245 GO:0004672|GO:0006468
Stsc91173g00001 700 PRINTS Tyrosine kinase catalytic domain signature 653 675 IPR001245 GO:0004672|GO:0006468
Stsc91173g00001 700 ProSitePatterns Protein kinases ATP-binding region signature. 436 457 IPR017441 GO:0005524
Stsc91173g00001 700 MobiDBLite consensus disorder prediction 318 341 - -
Stsc91173g00001 700 MobiDBLite consensus disorder prediction 250 291 - -
Stsc91173g00001 700 FunFam Serine/threonine-protein kinase isoform 1 421 508 - -
Stsc91173g00001 700 MobiDBLite consensus disorder prediction 396 418 - -
Stsc91173g00001 700 FunFam PAS domain-containing protein tyrosine kinase family protein 508 698 - -
Stsc91173g00001 700 Pfam PAS domain 90 182 IPR000014 -
Stsc91173g00001 700 Gene3D PAS domain 86 185 - -
Stsc91173g00001 700 Pfam Protein tyrosine and serine/threonine kinase 430 681 IPR001245 GO:0004672|GO:0006468
Stsc91173g00001 700 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 249 683 - -
Stsc91173g00001 700 MobiDBLite consensus disorder prediction 247 291 - -
Stsc91173g00001 700 SUPERFAMILY PYP-like sensor domain (PAS domain) 89 182 IPR035965 -
Stsc91173g00001 700 MobiDBLite consensus disorder prediction 390 420 - -
Stsc91173g00001 700 Gene3D Transferase(Phosphotransferase) domain 1 509 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91173g00001 Stsc-Chr91173 260 5599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91173g00001 6 688 MAP Kinase Kinase Kinase AT4G23050 46.400 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Stsc91173g00001 PK_Tyr_Ser-Thr 6.6e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91173g00001 - - gmx:100813707 974.926