Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91150g00002 ATGAAGAGCTGCGAGTTGTGCAAGGTTCCGGCCAGGGCCTTCTGCGAGTCCGACCAGGCAAGCCTCTGCTGGGACTGCGACGCCAACGTTCACGGTGCTAACTTCCTCGTCGCCAGGCACACAAGAACCCTTCTCTGCCACGCCTGCCAGTCACCCACCCCCTGGAAGGCTTCGGGTCACAGGTTAGGGCACACCGTCTCGCTCTGTGAGATGTGCGCAGGCGGAAACAAGCTCTCTGCGGAGGAGAGCGAAGGAGGCAATGACGACGACATAGACACCGAGGACGACGATCTCCAAGACGACGACGACGACGAGGAGGTTCAACCCGACGAGGACGAAGAAGACGGGGACAACCAGGTGGTGCCTTGGTCCTCGACGGAGCCGCCCCCGCCGGCTCCGAGCTCATCAAGCAGCGAAGACTCGGTCAGCCGCCGGTGCAAAGACGCCGACGAAGAGGATTTTTCTGAGACGGTTCCGTTTAAACGGCATCGTCACGATGAGGATCATGATTTTCCGGATGTTTCGAAAGGTTGGAGATGTAAACGGAGGCACAGTAGGGAATGGAGAGAGGAGGTTGGTTGGTTAGGATATGGCGGTGGAGCGCGGCGTTGA 612 0.5948 MKSCELCKVPARAFCESDQASLCWDCDANVHGANFLVARHTRTLLCHACQSPTPWKASGHRLGHTVSLCEMCAGGNKLSAEESEGGNDDDIDTEDDDLQDDDDDEEVQPDEDEEDGDNQVVPWSSTEPPPPAPSSSSSEDSVSRRCKDADEEDFSETVPFKRHRHDEDHDFPDVSKGWRCKRRHSREWREEVGWLGYGGGARR 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91150g00002 203 Pfam B-box zinc finger 2 42 IPR000315 GO:0008270
Stsc91150g00002 203 SMART bboxneu5 1 45 IPR000315 GO:0008270
Stsc91150g00002 203 CDD Bbox1_BBX-like 4 45 - -
Stsc91150g00002 203 MobiDBLite consensus disorder prediction 141 176 - -
Stsc91150g00002 203 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Stsc91150g00002 203 MobiDBLite consensus disorder prediction 79 176 - -
Stsc91150g00002 203 MobiDBLite consensus disorder prediction 85 118 - -
Stsc91150g00002 203 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91150g00002 Stsc-Chr91150 32011 33338 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91150g00002 2 132 C2C2-CO-like Transcription Factor Family AT4G27310 44.172 7.68e-36 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc91150g00002 zf-B_box 9.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91150g00002 - - gmx:100801024 185.267