Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91150g00001 ATGAGAACAGTTGCTTTTTTCTTCCTCTTCTGTCTGCAATTGCCATGCACCTTCAAGTCTTGTTTGGCAAGAGATTTCTTAAATGCTGGCCAAAACATAACTGGAACTACAAGTGTTCTTGTTTCAGGTGGACAAAGATTTGTACTAGGCTTCTTTTCACCTGCTGGAAACCCAACAGAGACTTACCTTGGAATATGGTACAACCAATCACAGTCCTTCTCTTCAGAACCACCACCAACAGTGGTATGGGTGGCCAACAGAGACAAACCAATTTTGAATTCCCATAATCTTGGAGTGTTCCAAATTGCAGATGATGGAAACCTGGTGGTCAAAGTCAAAGATGGAACATCAAGCATTAGTTATTATTGGTCCTCTGAACTTGAAGGCTCTTCATCAAGAAACAGGACAGTTAAGCTAATGGATTCCGGGAACCTAGTACTGTTCCAAAACGATCAGAATATGTGGCAGAGTTTCCAACACCCCACAGACACGTTTCTTCCGGGAATGAAAATGGAGACAAACATGGAACTAACTAGTTGGAGAGGTGACAGTGATCCAGGAACTGGGAAATTCACCTTCAAGATCATGTCTCAAACAGAAGAGGACAACCCTCCTTACATAATCTTGAACAACAGTAAACTCTACTGGGAGAGTAGTAGAGAAAACAGAGACTTGAATCCAGATTATCAGTTTGATGTTGTAGCTTACTTTCTGAACAACTTCAGTCGCTCTTCAAATATACAAGGTACCGTGATGAGTCACATGAACTACGAGAACACTAGGCTATTGATGAATTCAACCGGGGAGGTTCAGTTTCTAACAAGAGACAGTTTCCAAGGTGATTATTGGTCCGTTTATTGGAATGCTCCACAGAGCTTCTGCGACTCATACAATGCATGCGGCAAATTCTCCACCTGCAACCACAATAACATGGCGGCGCCATGCAAGTGTTTACCGGGCTTCAACCAAGTTAGTAAAAGTGATAGCAATGAGTATTGTGCTAGAAAATCATCAGCATGCGGAGAAGGCATAAGGTTCTTGAATTTGGTGATGGTGAAAGTGGGATTAAACCCGGATATGTATCCCACGGCAGCAGATGAAAGTGATTGCAAGAACAAGTGCATTCAAATGTGTCCCAAGTGCCAGGCCTACTCTTATAGTGTTCCTAAGGACACTACAAGGCTTGACCTTACTTTCTCCAATTGCTCTATTTGGACACACGATTTAATTACACTCCAAGAAGGTGACACTGATCCTAATGTTGGCCGTAATCTCTCTGTCCGGGTAGATATATCAGACTTAGAAGCAACTCCAAGAAGTTGTGAGCCTTGTGGAACAAATATAGTCCCTTATCCGTTGAGCACTGGACCAAATTGTGGTGACCCATCGTACTTCACTTTCAGTTGCAACAGCTCAACAGGTGAGCTTAGTTTCATACCTACTACGACCAGTGGCGGTTACAAAGTTGTTAGCATTGACGCAGATTCCAGAAAGTTCGTCATCCAAGTCAGTTCTGTGGACAGTTACTGTAGCGTGCAAAGGCGTAACGATAAAACTCTGCAAATTCATTTTCCGTTTAATGTGGCCAACGAGTGCCTCACAGAAGATGAATTAGAGGTTACTTGGCTACCACCTCCTGAACCCCTCTGCAATGAATCAGAGGATTGTAAGGGTTGGACCCACTCAACTTGTCAACAAATACAAAATGTTAAGAGGTGTCTTTGCAATTCAAACTATCGTTGGGATAATGCTTCTCTTAATTGTGTTATTCATGAAGCAGTAACCATCCCTGGTAGTACAGAACCAAAAGGAAGCAAAGGAAACTCAAAAAGCAGAAAGTCTTTGATTATTGAAGTAACTCTTGGAAGTGTTGTTATTCTGGCATGTGCAATAGTTTCTGCTTATTTATGCAGAAGCAAAATAACTTATAAGAAAGACAAGGATAAAATTCAGAGAAATCGAGGGCGATTTTATGACAGTGAAAGGCATGTGAAGGATTTGATGGAGGTTGAGGGATTAGAAGAAAAAGACCATGAAGGCATAGATGTACCTTATTTTGATTTTGAGAGCATACAAATAGCAACAGACAACTTTTCTGATGCAAATAAGCTTGGAAGAGGTGGTTATGGACCGGTCTATAAGGGTAAGCTCCAAGATGGTGAAGTTGTTGCAGTAAAACGGCTTTCAAGTGTTTCTTCACAAGGCTTAATAGAGTTTAAGAATGAGGTTGTTTTGATAGCCAAACTACAACATCGAAATCTTGTTAGGCTAAGGGGCTATTGCATCAAAGGAGACGAAAAGATTTTACTCTATGATGGATATATGTCTCCTGAATATGCATTAGATGGGATCTTTTCAACGAAATCTGATGTTTTCAGCTTTGGTGTGGTAGTACTAGAAATTATAAGTGGGAAAAGAAACACAGGATTTTATCAATCCAGCAAAGTTCCAAGCCTTTTAGGCTATGCGTGGAAACTGTGGACAGAGAATAAGTTGATAGACCTAATGGAGATGAATTTAGCAGAAAGTTGCAATGAGAATCAGTTTATTAGGTGTGCACATGTTGCACTCTTGTGTGTCCAAGATGAACCAAGTGAGCGACCAAGCATGTCAAGTGTAGTGACATTGCTGGATAGTGAGACTTCAACACTTCCAACCCCAAAACAACCAACATTTTTTGCAAGCAGAGGCCAACACACTTTTTCTTCCATTAAATCAACAGAAATAATAAATATGCAATTTGAGAGTACCACTCATTATCAGGAATGTCGATGGACAAAGGATTTTCTGAGCAGTGGCCAAAACATAACCGGAACAACGAGTGTTCTTTCTTCAGCCAACCACAAATTTGTATTAGGCTTCTTTTCTCTTCCTGGAAGCCCTACACCAAGTTACCTCGGAATATGGTACAACCAAACACAATACCCGTCAAAACTTCCAACAGTGGTGTGGGTTGCCAACAGGGACAACCCTGTTACAGGTTCCAGCAACTATGGAGTCTTCCAATTTTCACAAGATGGTAATCTTGTAGTAACAGATTCTTCAGGGGTAACATATTGGTCCTCTAAACTCGAAGGACCTAATTCTTCAGCTTCTATTACCCCCACGGACACTTTTCTTCCGGGGATGAAGATGGATGCTGATTTGAAACTGGTTTCTTGGAGCAGTGACAATGATCCTAAGCGTGGAAGCTACATCTTCATGATGGATCCAACTGAGGACGCACCTTACATCATCTTGAAAAACTACCAACGATATTGGCAAAGAGGGAACCACTTGATCTCAGGTTCCGTCTTCCATTCTGTTGTTTATCTCTTGAACAACTTCAGTAGCACCACCACAGATGCAGCTCATGAAGAACATTCTAGAACAAACAATGATGATGGCTATGAGAACACGAGGTTAGTGATTAAGTCCAACGGGGAGCTTCAGTTTCTTGATTGGAACCACAGCAAAAGTGATTGGATGGTTCGGTGGAAGGCACCACATAGCTTCTGCGATGTTCATAACGCCTGCGGGCCCTACACAAGCTGCAACGTTAAGAACCATGATAGGTGTAAGTGTTTAGCGGGATTCAAACAATCCGGTGGAACAGGGTGTTCTAGAAGAAGTGGAAAAGCTTCTTGCGGAGTCAGATCCATATTCTTGGAGTTAGTTAAGATGAAGAGTACTGGGATCCCAGATGAAATGGTGGCTGCTGAAAGTAAAAGAGAATGCATGGAGATCTGCCGTCACAGGTGCCCAAATTGTCAGGCTTATTCATATGATGCATCTGCTACCAAGAATCACAGTCACAGAGATGTTTCTACTTGCTGGCTTTGGGCACGCAAGGACTTGAACACACTTGAACAATGCTACCATGTAGACCTAGATGAACAAGATGATTGTCGTAATATCTCTGTCCGACTAGACATATCAGACATAGCACCAACTCCAAGAAGTTGTGAACCTTGTGGAACAAACATGGTCCCTTATCCACTGAGAACTGCTCCTAATTGTGGTGACCCCATGTACTTTAACTTCACCTGCAACAACTCAACAGGCACACTAATCTTCTCAACTACTTCCAGTGGCACTCATTTAGTTACTAACATGGATGTAGATTCTAGAACATTTGTCATCAAGGTTGATCCTTCAAGCACTTACTGTGGACACGAGAGATTTATTAGTGATAGTAACAAAACTCTGCAGATTCAATTTCCATATAAGGTGACCAATGCTTGCCTTGCCCAAGATGAAGTACAAGTTACTTGGCTACCGCCACCCGAACCAATTTGCACTGACTCTGTAGGCTGTGAGGGTTGGAAACATTCACGGTGCAAAAGAACAAGAAATGAAAAGAGGTGTATTTGTGATGCAAATTATCACTGGGATGGTGTTTCCCTCCAATGTATTGAAGGAAGTGAAGGAATCTCAAAAAGTCAGATAGCTTTGGTTCTTGGGGTAACTTTTTCAATTGTGGTTGTTCTAGCAAGTGCAATCACTTTTGTCTTGTGGAAAAGGAAAATAATTCCAAGGAAAGGTAAGAATAAGAGATACCGAGAGCATTTGAAGGATTGGAAATTAGGAGAACAAGACAATGAAGGTATAGAGGTGCCATACTTTGATTTTGAGAGCATACTAGCAGCTACAGAAAACTTCTCAGATACCAATAAGCTTGGACAAGGTGGATATGGACCAGTCTACAAGGGTAAGCTTCAAAGTGGTGAAGTTGTGGCCATCAAGAGGCTTTCCCATGTTTCATCTCAAGGCTTAGAGGAATTTAAGAACGAAGTTGTTTTGATAGCCAAACTTCAGCATCGAAATCTGGTTAGACTAAGGGGATATTGCATCCATGAAAATGAAAAGATTTTATTATATGAATATATGCACAACAAGAGTTTAGACTCGCTTATATTTGATCCCGCTAAAAGTCCACTTGTAGATTGGAAAATGCGGTTTGATATAGTTCTAGGAATTGCACGAGGGATGCTTTATCTCCACCAAGATTCTAGGTTAAGAGTAATTCATCGAGATTTAAAAACCAGCAATATTCTTCTAGACGAAGAGATGCAACCAATAATTTCAGATTTTGGATTGGCAAAAATAGTAGGAGGCAAAGAAACCGAAGCGAATACTGAGAGAGTAGTGGGAACTTATGGATATATGTCTCCTGAATATGCTATGGATGGACTTTTCTCAACCAAATCAGACGTTTTCAGCTTTGGTGTAGTTGTGCTTGAAATTATCAGTGGTAAAAAGAACAGAGGATTCTATCAATCCAACGAATTTTCAAGCCTTATGGGTTATGTATACATGGAAACTATTGACAGAGGATAA 5319 0.411 MRTVAFFFLFCLQLPCTFKSCLARDFLNAGQNITGTTSVLVSGGQRFVLGFFSPAGNPTETYLGIWYNQSQSFSSEPPPTVVWVANRDKPILNSHNLGVFQIADDGNLVVKVKDGTSSISYYWSSELEGSSSRNRTVKLMDSGNLVLFQNDQNMWQSFQHPTDTFLPGMKMETNMELTSWRGDSDPGTGKFTFKIMSQTEEDNPPYIILNNSKLYWESSRENRDLNPDYQFDVVAYFLNNFSRSSNIQGTVMSHMNYENTRLLMNSTGEVQFLTRDSFQGDYWSVYWNAPQSFCDSYNACGKFSTCNHNNMAAPCKCLPGFNQVSKSDSNEYCARKSSACGEGIRFLNLVMVKVGLNPDMYPTAADESDCKNKCIQMCPKCQAYSYSVPKDTTRLDLTFSNCSIWTHDLITLQEGDTDPNVGRNLSVRVDISDLEATPRSCEPCGTNIVPYPLSTGPNCGDPSYFTFSCNSSTGELSFIPTTTSGGYKVVSIDADSRKFVIQVSSVDSYCSVQRRNDKTLQIHFPFNVANECLTEDELEVTWLPPPEPLCNESEDCKGWTHSTCQQIQNVKRCLCNSNYRWDNASLNCVIHEAVTIPGSTEPKGSKGNSKSRKSLIIEVTLGSVVILACAIVSAYLCRSKITYKKDKDKIQRNRGRFYDSERHVKDLMEVEGLEEKDHEGIDVPYFDFESIQIATDNFSDANKLGRGGYGPVYKGKLQDGEVVAVKRLSSVSSQGLIEFKNEVVLIAKLQHRNLVRLRGYCIKGDEKILLYDGYMSPEYALDGIFSTKSDVFSFGVVVLEIISGKRNTGFYQSSKVPSLLGYAWKLWTENKLIDLMEMNLAESCNENQFIRCAHVALLCVQDEPSERPSMSSVVTLLDSETSTLPTPKQPTFFASRGQHTFSSIKSTEIINMQFESTTHYQECRWTKDFLSSGQNITGTTSVLSSANHKFVLGFFSLPGSPTPSYLGIWYNQTQYPSKLPTVVWVANRDNPVTGSSNYGVFQFSQDGNLVVTDSSGVTYWSSKLEGPNSSASITPTDTFLPGMKMDADLKLVSWSSDNDPKRGSYIFMMDPTEDAPYIILKNYQRYWQRGNHLISGSVFHSVVYLLNNFSSTTTDAAHEEHSRTNNDDGYENTRLVIKSNGELQFLDWNHSKSDWMVRWKAPHSFCDVHNACGPYTSCNVKNHDRCKCLAGFKQSGGTGCSRRSGKASCGVRSIFLELVKMKSTGIPDEMVAAESKRECMEICRHRCPNCQAYSYDASATKNHSHRDVSTCWLWARKDLNTLEQCYHVDLDEQDDCRNISVRLDISDIAPTPRSCEPCGTNMVPYPLRTAPNCGDPMYFNFTCNNSTGTLIFSTTSSGTHLVTNMDVDSRTFVIKVDPSSTYCGHERFISDSNKTLQIQFPYKVTNACLAQDEVQVTWLPPPEPICTDSVGCEGWKHSRCKRTRNEKRCICDANYHWDGVSLQCIEGSEGISKSQIALVLGVTFSIVVVLASAITFVLWKRKIIPRKGKNKRYREHLKDWKLGEQDNEGIEVPYFDFESILAATENFSDTNKLGQGGYGPVYKGKLQSGEVVAIKRLSHVSSQGLEEFKNEVVLIAKLQHRNLVRLRGYCIHENEKILLYEYMHNKSLDSLIFDPAKSPLVDWKMRFDIVLGIARGMLYLHQDSRLRVIHRDLKTSNILLDEEMQPIISDFGLAKIVGGKETEANTERVVGTYGYMSPEYAMDGLFSTKSDVFSFGVVVLEIISGKKNRGFYQSNEFSSLMGYVYMETIDRG 1772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91150g00001 1772 Gene3D Transferase(Phosphotransferase) domain 1 1623 1771 - -
Stsc91150g00001 1772 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1623 1771 - -
Stsc91150g00001 1772 CDD B_lectin 32 161 IPR001480 -
Stsc91150g00001 1772 ProSiteProfiles Bulb-type lectin domain profile. 927 1064 IPR001480 -
Stsc91150g00001 1772 Pfam D-mannose binding lectin 80 176 IPR001480 -
Stsc91150g00001 1772 Pfam D-mannose binding lectin 981 1025 IPR001480 -
Stsc91150g00001 1772 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 1512 1622 - -
Stsc91150g00001 1772 SMART ntp_6 341 429 IPR003609 -
Stsc91150g00001 1772 SMART ntp_6 1210 1294 IPR003609 -
Stsc91150g00001 1772 Gene3D - 20 159 IPR036426 -
Stsc91150g00001 1772 Gene3D - 923 1062 IPR036426 -
Stsc91150g00001 1772 SMART blect_4 934 1060 IPR001480 -
Stsc91150g00001 1772 SMART blect_4 31 161 IPR001480 -
Stsc91150g00001 1772 Pfam S-locus glycoprotein domain 234 323 IPR000858 GO:0048544
Stsc91150g00001 1772 Pfam S-locus glycoprotein domain 1104 1194 IPR000858 GO:0048544
Stsc91150g00001 1772 SUPERFAMILY alpha-D-mannose-specific plant lectins 981 1090 IPR036426 -
Stsc91150g00001 1772 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 663 773 - -
Stsc91150g00001 1772 ProSiteProfiles Bulb-type lectin domain profile. 24 160 IPR001480 -
Stsc91150g00001 1772 ProSiteProfiles PAN/Apple domain profile. 1209 1296 IPR003609 -
Stsc91150g00001 1772 Gene3D Transferase(Phosphotransferase) domain 1 769 882 - -
Stsc91150g00001 1772 SMART serkin_6 1547 1766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91150g00001 1772 SUPERFAMILY Protein kinase-like (PK-like) 683 903 IPR011009 -
Stsc91150g00001 1772 ProSiteProfiles Protein kinase domain profile. 1547 1772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91150g00001 1772 CDD B_lectin 930 1029 IPR001480 -
Stsc91150g00001 1772 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 220 IPR036426 -
Stsc91150g00001 1772 SUPERFAMILY Protein kinase-like (PK-like) 1530 1752 IPR011009 -
Stsc91150g00001 1772 Gene3D Phosphorylase Kinase; domain 1 661 768 - -
Stsc91150g00001 1772 Gene3D Phosphorylase Kinase; domain 1 1509 1622 - -
Stsc91150g00001 1772 ProSiteProfiles PAN/Apple domain profile. 340 430 IPR003609 -
Stsc91150g00001 1772 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 761 882 - -
Stsc91150g00001 1772 Pfam Protein tyrosine and serine/threonine kinase 774 876 IPR001245 GO:0004672|GO:0006468
Stsc91150g00001 1772 Pfam Protein kinase domain 1548 1747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91150g00001 1772 Pfam Protein kinase domain 699 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91150g00001 1772 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 6 868 - -
Stsc91150g00001 1772 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1668 1680 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91150g00001 Stsc-Chr91150 3826 12177 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91150g00001 773 898 Receptor kinase-like Gene Family AT4G23190 46.512 1.53e-31 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc91150g00001 Pkinase 3.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91150g00001 - - adu:107462016 1253.81