Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc91145g00003 | ATGGGGAGGAAGAAGCCCACGGCACGCGACGATGATAACGTTCCTGCTGCATCACAAGGCGGCGGTAAATCTAAGAAGAAGGTAGTCATCGACGATGACGAGTATGCCATCGGACCTGACCTCACCGAGGAGCCGCAGGAGGAGAAGAAGCAGGCGGCACCACCAGCTGGCAAGAAGAAGGGTAAAAAGGGTAATGCCAAAGCTAAGGCAAAGGGTAAGGATGACGAAGATGATGACGATGATGTGGTAATTGGTGCGCCTGGGGACGATGATGATGATGAGGATGCTGGGATTGTGTTTGCTGGGAAGAAGAAGAAGGGTAAATCTAAGAAAGGTGGTGGTGGCAGTGTGTTCGCTGCTGCATCTGGTTTTGGCTTGCTTGGGGATGAGGGTGATGATGGCGGTGAAGATGATGATAAATCTGGGATAACTGGTGATGGCGGCGATGCTGCTGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGACGAGGACGAAGAGCCTGTGGTTAGTTTTACAGGTAAGAAGAAGCCCTCTAAGGGCTCGAAAAAAGGTGGTGGCAGTGTGTTCAGTGCCTCAGCTTTTGATGCTATTGATGATGCTGATAATGATGGTGAGGAGGAGGATGAGCCAGTGGTAAGTTTTTCGGGTAAGAAGAAACCCTCAAAGGGATCGAAGAAAGGTAGTTCATTCTCTGCCTCGGCCTTTGATGCTATTGATGATGGTGAGGAGGTGGTGGATAATGGCGGAGATGAGGATGAGCCAGTTATTGCTTTTACCGGGAAGAAGAAGTCTTCTAAAGGTGGCAAGAAGGGTGGTGGTGCTGCATTTTCAGCAGCTAGTTTTGACGACGGGGAGGAGGCTCAGAATGAAAAGGAGGAAGAAGAGGATGTTGAGGACATGGCAATTACCTTCTCTGGTAAGAAAAAGAAGTCATCAAAGTCTTCTAAGAAGGCTTCATTTAGTACAGCTTTTGCCGATGAAGAAGATGCTTCTGTAGCTGAGTCTGATAGAGATGGTGAGGATGAAGACGAGGTTTTGGTTGCGTTTTCGGGTAAGAAGAAGTCTTCTAAAAAGAAAAGCAGTGCTAAAACGGGTGATGAAACTGTTGAGCCTGAACAACCTAGTGCTGGAATTAGCAATGCAGATGCTGACAAAAATGTAAATAAAAGTGAAGGAGTCACTGAAACCTCGAAAAATAAGAAGAAGAAGAAAAACAAGAGTGGAAGAACTGCTCAAGAGGAGGAAGATTTAGATGCGATTCTTGCGGAGCTTGGTGAGGGCCCTCCAATATCTAAACCTTCTGCCCCTCAACCCCAGGATGATAAAGTTAAGCAGGATGATAAAGCTCAGCCTGTTTCTGAACCAGGCCCTGCTACTGATGCTGCAGGCGAAAAGGAGGGGGAAGAGGAGACAGTAGAGTCAGCTGCTGCAAAGAAGAAGAAAAAGAAGAAGGAAAAGGAAAAGGAGAAGAAGGCTGCAGCTGCTGCAGCCGCTGGAACTTTAGTAGAAAATGAAGCTAAAGAAGTTAAGGCCGAGCCTGCTGAAGCTAAGAAGAATGACTCAAAGGCCAAAGCAGTTGACAACAAGAAAGTGCCGAAGCATGTTAGGGAGATGCAAGAGGCATTAGCTCGAAGGAAGGAGGCCGAAGAAAGGCAGAAGAAGGAAGAGGAGGAGAGGTTGAGGAAGGAGGAGGAGGAGCGACGTAGGCAGGAGGAACTTGAGAGACAGGCTGAAGAAGCTAGACGCAGGAAAAAGGAAAAAGAAAAGGAGAAGCTCCAGAGAAAGAAGCAAGAAGGTAAACTGCTAACTGGTAAGCAAAAAGAGGAAGCTCGCCGCCTGGAGTTAATGAGAAAGCAGTTTCTTAATAGCACAGGAGGTGCAAATCTCCCTGGTGGGGACTCTGGTCCACCAGCCAAAAGGCCTATATATCAGACAAAGAAGTCGAAACCCACCCATCATCAGCAGAATGGTGCTGCTGTCTCCACAGCTGCTGCCGCCGTTGAGATGGCTGAAAGTGTTGAAGCAAAGGAAAATCAGGAGACAGCCACTGATGCAGGTTCAGATGAACAAGAAAAGGTTGAAGAAACTGTAGTGGAGCAGGTGGAGGAGAAAGTTGAACCTCCAGAAGCTGCTGAAGACAATGGAGAAGATGAGGATGATGATGAGGATGAATGGGATGCAAAAAGCTGGGATGATGTTAATCTGAATGCCAAGGGTGCATTTGCTGATGAAGATTCTGAGCCCGAACCGATTGCCAAAAAGGAGACAAAGACTGCTGTAACCATGAACAATGCTGCTGCTACAAAGAAAACTATTTCTAAGCCCGTGACCGAAGAAATTGTAGATAGAAAGCTTGTTGCTGACAAGAATAACTCAGAACCACCAAAATCTGCTTTGCCAAGGGAACCTGCAAAGCCAAAGGAAACACAGAAGTCTTCTGTGCCTCCTAAGCCAACTGAAGAGAACCTCCGTTCTCCAATTTGCTGTATCATGGGGCATGTGGATACAGGTAAAACTAAGCTTCTAGATTGCATTCGAGGTACTAATGTTCAAGAGGGTGAGGCTGGTGGTATCACACAGCAGATTGGTGCAACATACTTCCCTGCGGACAACATACGTGAAAGAACTAAGGAATTGAAAGCTGATGCAAAGCTAAAAGTTCCTGGTCTACTGGTTATTGATACCCCAGGGCACGAATCGTTTACTAACCTAAGGTCTCGGGGTTCAGGGCTATGTGATATTGCAATTTTGGTTGTTGACATTATGCATGGCTTAGAGCCACAGACAATTGAATCCCTCAATCTATTAAAAATGAGGAATACAGAATTCATTGTTGCCTTGAATAAGGTTGACAGGCTTTATGGGTGGAAAACATGTCGAAATGCTCCAATTATCAAAGCGATGAAACAACAAACCAAGGACGTTCAAAATGAGTTCAATATGAGGCTCGTTCAGATTATTACGCAACTGAAGGAACAGGGGCTAAATACTGAGTTGTATTATAAAAACAAGGAAATGGGAGAAACGTACAACATTGTACCTACAAGTGCAATAAGTGGTGAAGGAATCCCTGATTTGTTATTGTTGTTGGTTCAATGGACCCAAAAAACGATGGCTGATAAACTTACTTACAGTGATGAAGTGCAGTGTACTGTCTTGGAGGTCAAGGTTGTTGAAGGCCATGGAACTACTATTGATGTTGTTTTAGTTAATGGTGTTCTTCATGAAGGAGACCAAATAGTTGTCTGTGGAATGCAGGGGCCAATTGTGACGACAATTCGAGCTTTACTCACACCACATCCAATGAAGGAGCTCCGTGTTAAGGGTACATTTCTCCATCACAAAGAAATCAAAGCTGCAATGGGTATAAAGATCACTGCCCAGGGGCTTGAACATGCTATTGCTGGAACTGGTTTATATGTTGTGAAGCCTGATGATGATTTGGAAGATATTAAAGAATCTGCAATGGAAGATATGCGATCAGTCATGAGCAGGATTGACAGGAGTGGTGAGGGAGTTTGTGTGCAGGCATCTACCCTTGGTTCATTGGAAGCATTGCTGGAGTTTTTGAAAACACCAGAAGTGAATATTCCTGTTAGTGGTATAAGCATTGGCCCTGTGCATAAGAAGGATGTTATGAAGGCAAGCGTAATGCTTGAAAAGAAGCGAGAATATGCTGCTATATTGGCATTTGATGTCAAAGTCACTCCTGAGGCTAGGGACCTTGCAGAAGAACTGGGTGTGAAAATCTTCATCGCTGATATCATTTATCATTTGTTTGATCAATTTAAGGCCTATATCGATAACATTAAGGAGGAGAAAAAGAAGGAATCTGCTGATGAGGCAGTCTTCCCATGTGTTCTGAAAATTTTACCAAACTGTGTTTTCA | 3889 | 0.4518 | MGRKKPTARDDDNVPAASQGGGKSKKKVVIDDDEYAIGPDLTEEPQEEKKQAAPPAGKKKGKKGNAKAKAKGKDDEDDDDDVVIGAPGDDDDDEDAGIVFAGKKKKGKSKKGGGGSVFAAASGFGLLGDEGDDGGEDDDKSGITGDGGDAAEEEEEEEEEEDEDEEPVVSFTGKKKPSKGSKKGGGSVFSASAFDAIDDADNDGEEEDEPVVSFSGKKKPSKGSKKGSSFSASAFDAIDDGEEVVDNGGDEDEPVIAFTGKKKSSKGGKKGGGAAFSAASFDDGEEAQNEKEEEEDVEDMAITFSGKKKKSSKSSKKASFSTAFADEEDASVAESDRDGEDEDEVLVAFSGKKKSSKKKSSAKTGDETVEPEQPSAGISNADADKNVNKSEGVTETSKNKKKKKNKSGRTAQEEEDLDAILAELGEGPPISKPSAPQPQDDKVKQDDKAQPVSEPGPATDAAGEKEGEEETVESAAAKKKKKKKEKEKEKKAAAAAAAGTLVENEAKEVKAEPAEAKKNDSKAKAVDNKKVPKHVREMQEALARRKEAEERQKKEEEERLRKEEEERRRQEELERQAEEARRRKKEKEKEKLQRKKQEGKLLTGKQKEEARRLELMRKQFLNSTGGANLPGGDSGPPAKRPIYQTKKSKPTHHQQNGAAVSTAAAAVEMAESVEAKENQETATDAGSDEQEKVEETVVEQVEEKVEPPEAAEDNGEDEDDDEDEWDAKSWDDVNLNAKGAFADEDSEPEPIAKKETKTAVTMNNAAATKKTISKPVTEEIVDRKLVADKNNSEPPKSALPREPAKPKETQKSSVPPKPTEENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPADNIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNAPIIKAMKQQTKDVQNEFNMRLVQIITQLKEQGLNTELYYKNKEMGETYNIVPTSAISGEGIPDLLLLLVQWTQKTMADKLTYSDEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTFLHHKEIKAAMGIKITAQGLEHAIAGTGLYVVKPDDDLEDIKESAMEDMRSVMSRIDRSGEGVCVQASTLGSLEALLEFLKTPEVNIPVSGISIGPVHKKDVMKASVMLEKKREYAAILAFDVKVTPEARDLAEELGVKIFIADIIYHLFDQFKAYIDNIKEEKKKESADEAVFPCVLKILPNCVF | 1296 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc91145g00003 | 1296 | MobiDBLite | consensus disorder prediction | 709 | 728 | - | - | |
Stsc91145g00003 | 1296 | Pfam | Elongation factor Tu GTP binding domain | 827 | 1035 | IPR000795 | GO:0003924|GO:0005525 | |
Stsc91145g00003 | 1296 | Coils | Coil | 531 | 602 | - | - | |
Stsc91145g00003 | 1296 | CDD | aeIF5B_II | 1047 | 1157 | - | - | |
Stsc91145g00003 | 1296 | PANTHER | TRANSLATION INITIATION FACTOR IF-2-RELATED | 511 | 1296 | IPR015760 | - | |
Stsc91145g00003 | 1296 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 823 | 1114 | IPR027417 | - | |
Stsc91145g00003 | 1296 | SUPERFAMILY | Initiation factor IF2/eIF5b, domain 3 | 1148 | 1277 | IPR036925 | - | |
Stsc91145g00003 | 1296 | FunFam | Eukaryotic translation initiation factor 5B | 817 | 1045 | - | - | |
Stsc91145g00003 | 1296 | Coils | Coil | 465 | 497 | - | - | |
Stsc91145g00003 | 1296 | MobiDBLite | consensus disorder prediction | 505 | 616 | - | - | |
Stsc91145g00003 | 1296 | MobiDBLite | consensus disorder prediction | 329 | 343 | - | - | |
Stsc91145g00003 | 1296 | MobiDBLite | consensus disorder prediction | 673 | 708 | - | - | |
Stsc91145g00003 | 1296 | FunFam | Eukaryotic translation initiation factor 5B | 1165 | 1271 | - | - | |
Stsc91145g00003 | 1296 | Gene3D | - | 818 | 1045 | IPR027417 | - | |
Stsc91145g00003 | 1296 | Gene3D | - | 1167 | 1271 | IPR036925 | - | |
Stsc91145g00003 | 1296 | Gene3D | Translation factors | 1046 | 1166 | - | - | |
Stsc91145g00003 | 1296 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 823 | 1039 | IPR000795 | GO:0003924|GO:0005525 | |
Stsc91145g00003 | 1296 | PRINTS | GTP-binding elongation factor signature | 907 | 918 | IPR000795 | GO:0003924|GO:0005525 | |
Stsc91145g00003 | 1296 | PRINTS | GTP-binding elongation factor signature | 827 | 840 | IPR000795 | GO:0003924|GO:0005525 | |
Stsc91145g00003 | 1296 | PRINTS | GTP-binding elongation factor signature | 891 | 901 | IPR000795 | GO:0003924|GO:0005525 | |
Stsc91145g00003 | 1296 | PRINTS | GTP-binding elongation factor signature | 943 | 952 | IPR000795 | GO:0003924|GO:0005525 | |
Stsc91145g00003 | 1296 | MobiDBLite | consensus disorder prediction | 77 | 96 | - | - | |
Stsc91145g00003 | 1296 | FunFam | eukaryotic translation initiation factor 5B | 1046 | 1165 | - | - | |
Stsc91145g00003 | 1296 | CDD | IF2_eIF5B | 826 | 1036 | - | - | |
Stsc91145g00003 | 1296 | NCBIfam | small GTP-binding protein domain | 828 | 976 | IPR005225 | GO:0005525 | |
Stsc91145g00003 | 1296 | Pfam | Elongation factor Tu domain 2 | 1062 | 1137 | IPR004161 | GO:0005525 | |
Stsc91145g00003 | 1296 | MobiDBLite | consensus disorder prediction | 148 | 167 | - | - | |
Stsc91145g00003 | 1296 | MobiDBLite | consensus disorder prediction | 784 | 823 | - | - | |
Stsc91145g00003 | 1296 | MobiDBLite | consensus disorder prediction | 373 | 387 | - | - | |
Stsc91145g00003 | 1296 | Pfam | Translation-initiation factor 2 | 1151 | 1264 | IPR023115 | - | |
Stsc91145g00003 | 1296 | MobiDBLite | consensus disorder prediction | 461 | 480 | - | - | |
Stsc91145g00003 | 1296 | MobiDBLite | consensus disorder prediction | 1 | 759 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc91145g00003 | Stsc-Chr91145 | 32421 | 38099 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc91145g00003 | 248 | 1296 | Eukaryotic Initiation Factors Gene Family | AT1G76810 | 64.405 | 0.0 | 1012 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc91145g00003 | K03243 | - | gmx:100814875 | 1297.72 |