Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91145g00002 ATGGAAGGAAATTTGTCACAGGGAGGTTTGATGCAAGGTGGGGCTTCTTTTGGTGGTTTTGATTTGCCTCGGGTTCATCAACAGGGACAGCATCCTCATACCATGCATCAACAGCATCAAAATCTTCAGCGCCAAGGGTCCTCGGTTCATGAGGGTTTTCCACTTACAATGGGGAACTTGCAGAACTGTGATCAAACCATTTCCCTGACAGACTTTGGTAAGGGAGAAAGAAGCAAAAACTCGGCAAGCGAGGAAGATGAGCCGAGCTTTAATGAAGATGGTAGTGATGTTCACCATGAAACTGGTAGAGGGAAAAAGGGATCGCCTTGGCAACGGGTGAAGTGGACCGATAAGATGGTAAGGCTTCTCATAACAGCTGTTTCTTACATAGGAGAGGATGGAAGTTCTGACGGCAACGGAGGAAGAAGGAGATTTGCCGTCCTACAGAAGAAAGGTAAGTGGAAATCTGTTTCCAAGGTCATGGCCGAAAGGGGTTATCATGTTTCTCCTCAGCAGTGTGAGGATAAGTTTAATGATCTTAATAAAAGGTATAAAAAGCTTAATGATATGCTTGGAAGGGGCACTTCTTGTCAGGTTGTTGAAAATCCCACACTGTTGGATGTGATAGATTATCTTTCTGAGAAGGAAAAGGATGATGTTCGGAAAATATTAAGCTCAAAACACCTGTTCTACGAAGAGATGTGTTCTTACCATAACGGTAATAGGCTGCATTTACCCCATGATCCCGCCTTGCAGCGTTCGCTGCAGTTAGCACTTCGAAATAGGGATGATCATGATAATGATGATTTGAGAAAGTCACATCATGATGATCATGAAGAAGATGATCAAGATGCGGAATTCGACGATCATGATGACTTTGAAGAGAATTATACTACCCATGGAGACAGTAGAAGATCATATGGGTCTATGAAGAAATTGAAACAAGGACACTGCCAAGAAGATTCGACTAGTCTTGGTAGCTCTTTAAATTGTCAGCACTACAGCAAAAGTTCCTATCCCCACGGACAGATGGTCCAATCCGATGTGAATCAAGGTTTACCTGAAAGCATGCGAACAGCTTGGTTTCAGAAGCAATGGTTTGAATCTCGCTCGCTTCAGCTAGAAGAACAAAAGCTACAGATACAGGTTGAGATGTTGGAACTGGAGAAACAGAGATTAAAGTGGCAGAGGTTTAGTAAGAAGAAGGACCGGGAGTTGGAGAAGCTGAGTTTGGAAAATGAAAGAATGAAGCTTGAAAACGAACGCCTCGCTTTAGAACTGAAACGGAAGGAAATTGGTGCTGGCTTTAACTAG 1314 0.4323 MEGNLSQGGLMQGGASFGGFDLPRVHQQGQHPHTMHQQHQNLQRQGSSVHEGFPLTMGNLQNCDQTISLTDFGKGERSKNSASEEDEPSFNEDGSDVHHETGRGKKGSPWQRVKWTDKMVRLLITAVSYIGEDGSSDGNGGRRRFAVLQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPTLLDVIDYLSEKEKDDVRKILSSKHLFYEEMCSYHNGNRLHLPHDPALQRSLQLALRNRDDHDNDDLRKSHHDDHEEDDQDAEFDDHDDFEENYTTHGDSRRSYGSMKKLKQGHCQEDSTSLGSSLNCQHYSKSSYPHGQMVQSDVNQGLPESMRTAWFQKQWFESRSLQLEEQKLQIQVEMLELEKQRLKWQRFSKKKDRELEKLSLENERMKLENERLALELKRKEIGAGFN 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91145g00002 437 MobiDBLite consensus disorder prediction 264 280 - -
Stsc91145g00002 437 MobiDBLite consensus disorder prediction 30 57 - -
Stsc91145g00002 437 MobiDBLite consensus disorder prediction 264 326 - -
Stsc91145g00002 437 Coils Coil 369 396 - -
Stsc91145g00002 437 Gene3D - 115 186 - -
Stsc91145g00002 437 Coils Coil 399 431 - -
Stsc91145g00002 437 MobiDBLite consensus disorder prediction 71 110 - -
Stsc91145g00002 437 PANTHER F16F4.11 PROTEIN-RELATED 1 434 - -
Stsc91145g00002 437 MobiDBLite consensus disorder prediction 1 57 - -
Stsc91145g00002 437 MobiDBLite consensus disorder prediction 77 110 - -
Stsc91145g00002 437 MobiDBLite consensus disorder prediction 293 318 - -
Stsc91145g00002 437 Pfam Myb/SANT-like DNA-binding domain 112 237 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91145g00002 Stsc-Chr91145 23040 24353 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Stsc91145g00002 Myb_DNA-bind_4 3.2e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91145g00002 - - gmx:100816474 706.057