Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91143g00001 ATGGCTTGGTCTTTTCTCTTTCTTGAGGGAAAAGAAGCTGTGAAGGACTGGCTGGACAGGCTCAAGGATGCTGAAGATGTGCTGGATGAAGTTGCCACCAAAGCTGCCACTCAAAAGGATCCAGGTAACTTCCTGTCTCGCTATTTCAATTTGAGTGGTGATGCTGAGATAGTGACCAAGATTGAAGAGATCATTGCTGCCGTTGTAAAAGAGAAAGATGGTCTTGGCTTGAAGGAGATTCCGGTGGAAGACATGTCATGGAGAATCCCCTCAACATCTCTGGTTGATGTGCATCAAATACATGGCAGGAACCAAGATAGGGAGGCCATTGTAAAATTGTTGCTTGATGATACTAATGGTGGTGAAATTTCTGTTATTCCTGTCGTGGGCATGGGTGGAATAGGAAAGACTACTTTGGCTCAGCTGGTTTACAATGATGACCGAGTGCAGCAAAAATTTGATGTTAAGGCTTGGGTTTGTGATGGGAAAGAAGAATTTGATGTTCTTAAGGTGACGAAGTCTGTGAGGGAAGCAACTTCTAGCTGTTGTAACTCAACTGAGTTAAACACAATTCAGGAGAGTTTGAAGAAACTCCCAGCAGAGAAGAAGGTATTGATTGTTTTGGATGACATGTGGAGTAACAATTATGATGCTTGGATGAGTTTTCTAAAGCCTTTTAAATATATTAAGGGTGTTAAGATTCTTGTAACAACCCGACTTGATTCGACTGCTGATATGGTGAAAACTATTCCTACTTACATTTTGAGCTTTTTGGATGATGATGATTGCTGGTCAGTGTTTGCAGATCATGCATGTCTTAATTATGCTGAATCCCAAAGCTGTTCTGCATTAGAAGTAGTTGGTCGAAAAATTGTCAAAAAGTGTAATGGGTTAGCTTTGGCTGCTCGAACACTTGGAGGTTTATTGAGAGCAAGAAAAGAAGCAGCGGATTGGGAGTTTATATTGAAGAGTGAAATTTGGGAACTTCCAAAAAGAGACCATGGAATTCTTCCGGCGTTAATAATTAGTTATCACTATCTCCCCTCGTACTTAAAACGTTGCTTTGTTTATTGTTCTTTATTCCCAAAAGACTATGAATTCAGAAGAAATGAACTGGTGCTATTGTGGATGGCAGAAGGTCTTTTGCAACAACCAAAGAGTGGTGGAAGTACGTTAGAAAAAGTCGGTCATAAATATTTTAACGATTTGGCTTCGAGATCATTTTTTCAACCTTCTAAAAGTGATGAAAATTCATTCGTGATGCATGATCTCATGCATGATTTAGCAATATTCTATGGTGGGAAGTTCTTTTCTAGAACCTTTGATCTTGAAGCTGCAAACAAGCATGATGCTTGCCCTCGTCATCTTTCATTTGATCTTGGCATCACTTACTCGTTCTCAAAGATCTTGGAAGCATGTGATAGCTCAAAAAATGCAAGGACATTTCTGGGAATCAATTATGATGGGTATCATGATTCCTCAGAGGAAATTGATCCTTGTCACTTACTTGCACGGTTGAAGCACTTAAGGGTTTTGTCATGTAAATCCTTTCTTCTTGGTGACCATGATTCATTGCTCAATTCAATAGGCGATTTGATTCATTTGCGTTATTTGGATCTCTCTGGTGCACCTATCGCGACACTGCCCGAGTCAATATGCAAATTGTATAATTTACAAACATTGAAGTTGAACAGTTGTTCAGGACTAACAAAACTTCCAAGCAAGATGCAAGATCTTGTAGATTTGCGCCATCTCGATATTGAAAAGACAGATTTAGAAGAGATGCCAAAAGGGATGAGTAAATTGAAAGAGTTGCAGTTTTTAAGTTACTATCTTGTTGGCAATGAAGAGAATGGGATAGAGCAATTGGGAGAACTTGTAAATCTTCAAGGGTTCTTTCATATTAAGAAATTAGAGAACGTCACTGACAAAAGTGAAGCTTGTGGCGCAAGGATGGTCGAAAAGAAGTACATCAGTGGTTTATGTTTGGAGTGGTCATCAGGTGAAGATGGTGATTCCCAAGTCAAAAAAGAAGTACTTGACAAATTACAACCTCACAATGACTTGAAATATCTAACAATTAAGCGTTACAAGGGCTCCATGTTTCCAGATTGGGTAGGGCAGTCTTCGTACCACAACATGACTGAGTTGAAGCTGAGTGGATGCAGGAATTGTCGGGTGCTTCCTTCAGTTGGACATTTACCCTCTCTAGAGACTCTTATCATTTCAAACTTCAACAATCTGAAGAAGATTGGTGGCGAATTCTGTAAGGGGGATGGAACTGATCATCTTAAGGACACACCCTTCCAATCCCTTAAAAATCTGTAG 2328 0.3978 MAWSFLFLEGKEAVKDWLDRLKDAEDVLDEVATKAATQKDPGNFLSRYFNLSGDAEIVTKIEEIIAAVVKEKDGLGLKEIPVEDMSWRIPSTSLVDVHQIHGRNQDREAIVKLLLDDTNGGEISVIPVVGMGGIGKTTLAQLVYNDDRVQQKFDVKAWVCDGKEEFDVLKVTKSVREATSSCCNSTELNTIQESLKKLPAEKKVLIVLDDMWSNNYDAWMSFLKPFKYIKGVKILVTTRLDSTADMVKTIPTYILSFLDDDDCWSVFADHACLNYAESQSCSALEVVGRKIVKKCNGLALAARTLGGLLRARKEAADWEFILKSEIWELPKRDHGILPALIISYHYLPSYLKRCFVYCSLFPKDYEFRRNELVLLWMAEGLLQQPKSGGSTLEKVGHKYFNDLASRSFFQPSKSDENSFVMHDLMHDLAIFYGGKFFSRTFDLEAANKHDACPRHLSFDLGITYSFSKILEACDSSKNARTFLGINYDGYHDSSEEIDPCHLLARLKHLRVLSCKSFLLGDHDSLLNSIGDLIHLRYLDLSGAPIATLPESICKLYNLQTLKLNSCSGLTKLPSKMQDLVDLRHLDIEKTDLEEMPKGMSKLKELQFLSYYLVGNEENGIEQLGELVNLQGFFHIKKLENVTDKSEACGARMVEKKYISGLCLEWSSGEDGDSQVKKEVLDKLQPHNDLKYLTIKRYKGSMFPDWVGQSSYHNMTELKLSGCRNCRVLPSVGHLPSLETLIISNFNNLKKIGGEFCKGDGTDHLKDTPFQSLKNL 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91143g00001 775 Pfam NB-ARC domain 106 323 IPR002182 GO:0043531
Stsc91143g00001 775 Gene3D - 343 430 IPR036388 -
Stsc91143g00001 775 PRINTS Disease resistance protein signature 198 212 - -
Stsc91143g00001 775 PRINTS Disease resistance protein signature 125 140 - -
Stsc91143g00001 775 PRINTS Disease resistance protein signature 295 309 - -
Stsc91143g00001 775 PRINTS Disease resistance protein signature 553 569 - -
Stsc91143g00001 775 SUPERFAMILY L domain-like 420 756 - -
Stsc91143g00001 775 PANTHER DISEASE RESISTANCE PROTEIN RP 54 756 IPR044974 GO:0006952
Stsc91143g00001 775 FunFam Probable disease resistance protein At1g63360 344 431 - -
Stsc91143g00001 775 Gene3D - 85 253 IPR027417 -
Stsc91143g00001 775 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 358 IPR027417 -
Stsc91143g00001 775 Coils Coil 14 34 - -
Stsc91143g00001 775 Gene3D - 257 342 IPR042197 -
Stsc91143g00001 775 Gene3D Ribonuclease Inhibitor 468 775 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91143g00001 Stsc-Chr91143 11784 17868 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91143g00001 122 320 WRKY Transcription Factor Family AT5G45050 26.699 1.11e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91143g00001 - - aip:107627934 889.412