Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91142g00003 ATGACAGCGGGTCCTGAAGCTGAGGATGGAAATGAACAAACACACGAGTTTTTGTGTGATGTCGAGAAGGAGTATATTCCAAAGGTTGGAATGACATTTCAAACACTTGCTGAGGTTGGTTTGTTCTACAAAGAGTATGCCAAACGTGCAGGGTTCTCTACTAAAATAATAAACACAAATAGATGTAAGGAGACAAAGGAAGAAATGAATCAACTCATAACATGTAACAGAGAAGGAAAATGGACATCCGAAGTACCTTATGTTGAGAAGACGAATCCTATCTGTAGTGCAAACTGTCCTGCACGAATTTATGCTCACGTAGTAAAGATAACCGAATGTGGCGCATTTCAAAAGTAG 357 0.395 MTAGPEAEDGNEQTHEFLCDVEKEYIPKVGMTFQTLAEVGLFYKEYAKRAGFSTKIINTNRCKETKEEMNQLITCNREGKWTSEVPYVEKTNPICSANCPARIYAHVVKITECGAFQK 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91142g00003 118 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 108 - -
Stsc91142g00003 118 Pfam FAR1 DNA-binding domain 42 106 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91142g00003 Stsc-Chr91142 15033 15577 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc91142g00003 FAR1 8.4e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91142g00003 - K17604 adu:110280446 110.153