Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91136g00003 ATGACACTCCAAAACAACCACCCAAGAAGTGATGATGATTATGCTAATGAACATTCTCCATTGCTACCAACAAAGAGAAATCATGGTGATGGTGATGGTGATGGTGGTGGTGGTGCATCCTTTGTTGGGTCAGTGTTCAATTTATCAACAACAATCATTGGTGCTGGAATCATGGCCTTACCAGCAGCAATCAAAGTGCTTGGTCTTCTCCTTGGCATTTCATCAATCATCTTCCTTGCATTCCTCACTGACACCTCTCTTGACATACTCTTAAGGTTCAGCAGAGTTGCAAAAGCTGAAAGTTATTCTCATGTCATGGGTTCTGCTTTTGGAAAATTTGGAAGAATGGTTCTTCAGATATCTGTTCTCATCAACAATTTTGGGATACTTGTTGTCTATATGATCATAATTGGTGATGTGCTGTCTGGAACATCATCAAGTGGAATTCACCATTTCGGTGTGCTAGAAGGATGGTTCGGCGAATGTTGGTGGACCGGCCGTTATTTCATTCTTCTTGTGACAACCCTTTTCATATTTGCTCCATTGGCATTTGTTAAGAGAATAGATTCATTGAGATATTCTTCTGCTTTAGCGGTGGCTCTCGCGATCGTGTTTCTAGTCATAACTGCAGGAATCACACTGTTTAAATTGTTTAATGGCAGCATTGCTAGTCCGCGGATACTTCCAAATGTTACTGATAGTGCATCTCTATGGAATCTCTTCACAGCAGTTCCAGTTCTTGTGACTGCATTTGTGTGCCATTACAATGTTCATACAATAGACAAGGAGCTTGGAGATTCCTCTTTGATACAACCGGTTGTGCGCGCATCACTATCTTTGTGTTCCAGCATCTATATTCTTACAGCCTTATTCGGATTTCTCCTATTTGGCGAATCAACTCTTGATGATGTGCTCGCCAACTTTGATACTGATCTTGGCATCCCTTACAGCCGTCTCCTTAACGATGTTGTTCGCATTAGCTATGCCCTCCACCTCATGCTTGTTTTCCCAGTTATCTTCTTCTCGTTGCGCTTCAATTTGGACGACCTTATTTTTCCTTCGGCTAGGCCGTTGAATTCGGATCGGTGTAGATTCGGCTTGATCACCAGTGGACTTGTTGCTTTAGTGTACATAGCTGCAAATTTTATACCTAGCATATGGGATGCTTTTCAATTCACTGGAGCCACTGCCACTGTTTGCCTCGGGTTTATTTTCCCGGCTTCGATAGCTCTAAGGGATTCCCATGGCATTGCATCAAAGAAGGACAAGATTTTATCCGTTCTAATGATCGCTCTTGCTGTGTTCTCGAACGTCATAGCGATATACAGTAATGCCAATTCCATGTTCAAGAAGCAAGTTGATCATCATCATTGA 1374 0.4229 MTLQNNHPRSDDDYANEHSPLLPTKRNHGDGDGDGGGGASFVGSVFNLSTTIIGAGIMALPAAIKVLGLLLGISSIIFLAFLTDTSLDILLRFSRVAKAESYSHVMGSAFGKFGRMVLQISVLINNFGILVVYMIIIGDVLSGTSSSGIHHFGVLEGWFGECWWTGRYFILLVTTLFIFAPLAFVKRIDSLRYSSALAVALAIVFLVITAGITLFKLFNGSIASPRILPNVTDSASLWNLFTAVPVLVTAFVCHYNVHTIDKELGDSSLIQPVVRASLSLCSSIYILTALFGFLLFGESTLDDVLANFDTDLGIPYSRLLNDVVRISYALHLMLVFPVIFFSLRFNLDDLIFPSARPLNSDRCRFGLITSGLVALVYIAANFIPSIWDAFQFTGATATVCLGFIFPASIALRDSHGIASKKDKILSVLMIALAVFSNVIAIYSNANSMFKKQVDHHH 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91136g00003 457 MobiDBLite consensus disorder prediction 10 30 - -
Stsc91136g00003 457 PANTHER AMINO ACID TRANSPORTER 34 436 - -
Stsc91136g00003 457 Pfam Transmembrane amino acid transporter protein 38 446 IPR013057 -
Stsc91136g00003 457 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91136g00003 Stsc-Chr91136 19359 22532 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91136g00003 4 456 Amino Acid or Auxin Permease AAAP Family AT3G30390 62.996 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91136g00003 K14207 - gmx:100778699 691.034