Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91131g00002 ATGTTATTTGTTGTTGCATTAGTGTTAGTCCTTGTAGAAGTAGAAGCAGTAGTAGCTATAGATGATAGAAACCAAATAGCCCTTGATGGGTGCCAAAGTGAGTGTTACGGTTTTCAAGTTCCATACCCATTTGGCATAGGAAATTCAACTGTAACCGGTAATACCTGTTTCTTGGAAAAACCATTTGAACTTACTTGCAACAACACTAGTAGAAGCCTAATATGGGGACGCAATATCCCAGTGATAGCCATAAACATCACTAAAGCTCAAGCAGATATGAATATTTTTGTATCCCATTATTGTTATAATAGTAGCAAAGACAACATCTCTGCAATTAGCATTAATCGCAGGCTCTCAAGCATTCCTTCTTTCACAATTTCTAGCAAAGACAACAAGTTCATAAGCGTCGGCTGCGATACGTACGGCTACCTTAATAGCTTCTACGACGCCAATGATACCACCGCCGGGTACTCGACCGGGTGCTTAACGAGATGCTATGGAAACACAAAGGAGATCAAGAACGGAGATTGTTCCGGCATCGGGTGCTGCGAGGTGGATATTCCTCCAAGAATGAGCAAGGTGTCAACTCAAGTTGGTACCTTTGAGAATTTCAGGAGTTCTCTTTCCTTCAACAACTGTAGCTATTCTTTTGTTGCCAAGAATGGAAGCTACACGTTTTCCAAGGACCACTTGGAGAAGCTACCATATGAGAAGCTCCCTGTGCTGTTCGATTGGAGTGTTCTTGGCAATCAGCAGCAGCAGACATGTGAAGAAGATTCTTTGAGCAATAATAATGTTTGCAAGGAAAATAGTCATTGTGTGAATGCATCAGACACTACTGGTTATGGTTATCGGTGCCAATGCAACCAAGGTTTTGAAGGAAACCCATATCTTCATGGTTGCACAGATATTGATGAATGTAATAGGGGACTGCATACATGTAAAAGTGACTACAACTGCCACAATACAAAAGGATCCTACGAATGCTTTTGTCCTAACGGCCAATCAGGAAGCGGAACAAAAGAAGAAGGGTGCCATAAGAAAGATTTCCTTCTTCCAATTGTCATTGGTGCAAGTGCTGGATCCATAGCTATTTTTGTGGGGACTTGTTTGTTATACTTAACATACCAAAAGAGAAAACTCATGAAGCTAAAAGAAAAGTTTTTTAAGCAAAATGGTGGTCTTCTTTTGCTACAACAACTCTCTACAAGAGAAGAGTCCTCCCACACTACACAAATTTTCACCTCCGGCGAATTGATGAAAGCCACCAACAACTACGACGAGAACTTAATCGTCGGCAGGGGCGGTTACGGCACAGTTTACAAAGGAGTTCTAGAGAATGACACAGTTGTTGCTATCAAGAAGTCAAAAATAGTTGACCCTGACCAAGTTCAACAGTTCATCAATGAGGTGATTGTTTTGTCCCAAATTAACCACAGAAATGTGGTGAAGCTTTTGGGTTGTTGTTTAGAAACAGAAGTCCCTCTTTTAGTCTATGAGTTTGTAAGAAACGGCACACTTTTCGATTTCATCCATGACGAAAACAAGAGAAAACGTTTCGATTGGAAAAATCGTTTAAGAATCGCAGCAGAGGCGGCCGGAGCTTTATCATATCTTCACTCAGCTGCTTCCATACCAATTGTCCATAGAGATGTTAAGAGTGCCAACATTCTCTTAGATGAAGATTACACTGCAAAAGTCTCTGACTTTGGAGCTTCAAGATTCGTTCCGGGGGACGAAATTGCATTGGCTACAATGGTGCAAGGAACTATTGGCTACTTGGATCCAGAGTACATGCAAAGTAGCCAACTAACCGAGAAAAGTGACGTGTATAGCTTCGGCGTGGTGCTCGCGGAGCTTCTTACAGGAAAGAAACCTTTTTCGTTCGAAAAGTACCCGGAAAAGAAAACAAATCTTGCTGCTTACTTGCTGTCTTGCCTGAGAGAGGATTGCTTGGTTGAAGCTCTTGAAGATGGAATGTTGAATGAAGAAAATAAGCAAGAGATTGTGGAAGTTGCTGTTGTTGCAGGGAAGTGTTTGAGAGTTAGAGGGGAAGATAGACCAAGCATGAAGGAAGTGGCAATGGAATTGGAGGGAATAAGGGTAATGTCAAAGCACCATTGGGTTAATAATAATGCTCACAAGAATTTTGAGGAGACTGAATACTTGCTTCCTAAATCATCATGGTCAGAAACTTATGAGCATGGTGATAGCAGTAGCAGTAGTCATCAAAATACAAAATATGATAGCATCATCAGGGATCAGGAAGTGCTAATTGCCTTAGAAAATGGAAGATGA 2298 0.413 MLFVVALVLVLVEVEAVVAIDDRNQIALDGCQSECYGFQVPYPFGIGNSTVTGNTCFLEKPFELTCNNTSRSLIWGRNIPVIAINITKAQADMNIFVSHYCYNSSKDNISAISINRRLSSIPSFTISSKDNKFISVGCDTYGYLNSFYDANDTTAGYSTGCLTRCYGNTKEIKNGDCSGIGCCEVDIPPRMSKVSTQVGTFENFRSSLSFNNCSYSFVAKNGSYTFSKDHLEKLPYEKLPVLFDWSVLGNQQQQTCEEDSLSNNNVCKENSHCVNASDTTGYGYRCQCNQGFEGNPYLHGCTDIDECNRGLHTCKSDYNCHNTKGSYECFCPNGQSGSGTKEEGCHKKDFLLPIVIGASAGSIAIFVGTCLLYLTYQKRKLMKLKEKFFKQNGGLLLLQQLSTREESSHTTQIFTSGELMKATNNYDENLIVGRGGYGTVYKGVLENDTVVAIKKSKIVDPDQVQQFINEVIVLSQINHRNVVKLLGCCLETEVPLLVYEFVRNGTLFDFIHDENKRKRFDWKNRLRIAAEAAGALSYLHSAASIPIVHRDVKSANILLDEDYTAKVSDFGASRFVPGDEIALATMVQGTIGYLDPEYMQSSQLTEKSDVYSFGVVLAELLTGKKPFSFEKYPEKKTNLAAYLLSCLREDCLVEALEDGMLNEENKQEIVEVAVVAGKCLRVRGEDRPSMKEVAMELEGIRVMSKHHWVNNNAHKNFEETEYLLPKSSWSETYEHGDSSSSSHQNTKYDSIIRDQEVLIALENGR 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91131g00002 765 Gene3D Laminin 306 345 - -
Stsc91131g00002 765 CDD EGF_CA 303 337 - -
Stsc91131g00002 765 Gene3D Transferase(Phosphotransferase) domain 1 502 722 - -
Stsc91131g00002 765 ProSitePatterns Serine/Threonine protein kinases active-site signature. 547 559 IPR008271 GO:0004672|GO:0006468
Stsc91131g00002 765 SUPERFAMILY Protein kinase-like (PK-like) 412 726 IPR011009 -
Stsc91131g00002 765 ProSiteProfiles EGF-like domain profile. 303 346 IPR000742 -
Stsc91131g00002 765 FunFam Fibrillin 2 298 343 - -
Stsc91131g00002 765 Pfam Protein kinase domain 428 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91131g00002 765 ProSitePatterns Protein kinases ATP-binding region signature. 432 455 IPR017441 GO:0005524
Stsc91131g00002 765 Pfam Wall-associated receptor kinase galacturonan-binding 31 88 IPR025287 GO:0030247
Stsc91131g00002 765 ProSitePatterns Calcium-binding EGF-like domain signature. 303 329 IPR018097 GO:0005509
Stsc91131g00002 765 SUPERFAMILY EGF/Laminin 303 338 - -
Stsc91131g00002 765 Gene3D Laminin 259 305 - -
Stsc91131g00002 765 ProSiteProfiles Protein kinase domain profile. 426 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91131g00002 765 SMART serkin_6 426 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91131g00002 765 ProSitePatterns EGF-like domain signature 2. 286 301 IPR000742 -
Stsc91131g00002 765 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 27 710 IPR045274 GO:0007166
Stsc91131g00002 765 SMART egfca_6 303 346 IPR001881 GO:0005509
Stsc91131g00002 765 CDD EGF_CA 262 294 - -
Stsc91131g00002 765 FunFam Wall-associated receptor kinase 2 502 720 - -
Stsc91131g00002 765 Pfam Calcium-binding EGF domain 303 345 IPR001881 GO:0005509
Stsc91131g00002 765 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 320 331 IPR000152 -
Stsc91131g00002 765 FunFam Wall-associated receptor kinase 2 396 501 - -
Stsc91131g00002 765 SMART egf_5 306 346 IPR000742 -
Stsc91131g00002 765 SMART egf_5 255 302 IPR000742 -
Stsc91131g00002 765 CDD STKc_IRAK 432 700 - -
Stsc91131g00002 765 Gene3D Phosphorylase Kinase; domain 1 395 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91131g00002 Stsc-Chr91131 22630 25965 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91131g00002 2 765 Receptor kinase-like Gene Family AT1G21230 44.430 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Stsc91131g00002 Pkinase 3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91131g00002 - - gmx:106795446 844.343