Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91126g00002 ATGGGCGCCGTTGTTGACTGTTATCCGCCGCACGCCGGCGAGGTTGCCGTTTTGTCCCTCAATTCGCTTCCTTTAGGGTTCCGATTTCGACCTTCTGATGAGGAGCTTGTTGATTATTATTTGAGACAGAAGATCAACGGAAACGGAGAAGAGGTCTGGGTTATTCGAGAAATCGATGTCTGCAAATGGGAGCCTTGGGATTTACCAGATTTATCTGTGATAAGGAACAAGGATCCAGAATGGTTCTTCTTCTGTCCACAGGACCGGAAGTATCCAAACGGTCACCGGTTGAACCGAGCAACGACTCATGGGTATTGGAAGGCCACAGGGAAGGATCGTAAGATCAAGTCAGGCTCCACCTTGATTGGGATGAAGAAGACTCTGGTTTTCTACACAGGTCGTGCTCCCAAAGGAAAGAGAACCAACTGGGTCATGCATGAGTACCGCCCCACCCTCAAGGAGCTTGATGGCACCAACCCTGGACAGAACGCGTATGTACTCTGCCGGTTATTCAAGAAACAAGATGAGAGTCTTGAGGTTTCGAACTGTGATGAGGTGGAGCAAACAGATTCAGCTCCCCTGGCGGCCAATTACTCCCCTGAAGAAATACAGTCTGATCAGGCTCCGGCTGAAGTATCGCCGTCTCAGGTCACGGATGATAAGCACCAGGGAGTTATCCCTGAGCACTCCGAGGAAGCGGTTTCCAATGTTATTACCTCTGCTGATTGCCATAGTGATGGATATGATGCTTGTGAAACGCAAAATCAAGCTTTAGAACTGCCTGCTGAGGACATTCCGCCGATAAATTGGGACATATTCAATGACCCCGAAGACAAGATATTTGATGACAAATTATTCTCGCCAATCCACAGCCATATTCCACCAGAATTTTACTACCAAGCAAACAATGAGACAAATATTGCAGACATCTTAAATTCTGTCAATTGGGATGAGATCTCCTATGAGGATCCCTATAGTCAGACACAGAACAACTTCTTTCATGATGTTAAACAAAGCATATCAGGTAGCGAACCTGATGCGGGGGTCACCAATATGACATGTATACACCCAATGAATGTTGTATATCCCGATGAGGCAATTCATAGAAGGGTTGCTATGGCAACAACTCCACAGTATTGCAGCAACTTCACATCTGACTTCAGCGCTGATGAGCAGAAGAGCAATGTTTCATTAATTCAAAACAATTCCCAGATGGCTTGTTTCTCTGATCCCAGAACAGGCCAGGTGTATAACGTATTCAATGATTACAGAAACCTCAATACCTTTGCTAGTGGTGATACCGGAATCAAGATAAGGACCCGGCAAGTTCGAAATGAACAACCAGCAATGAACTTTCCCAATCAAGGTAATGCAGATAGGAGAATCCGATTGCTAAAGCGACGGCTAAATGTCTCAAACAAAATGAAAGATGTGGGGGTTCCTGAACAAGAGCATGATTCAAAACCAATCACTGCAGAGGAGAACAAGAACAAGACTTCTAAAACTCATACTGCAGATGAGAGTGCTACTGCTAATGATGTGAACGAACGCCAGGAGAAAACCGAGTCAACTGATAAGAGAAACCTGATAACTAAACAATTTGGAAAGGGAGGTTCTTCCATGTTGGGGTTGAAGGGATTATTGCGCAGAAGGCTCGGTTACATATCAAAGGCTTCCTCCAATTTCAAAATGTGGTCTTGTGTTGTTGTGGCTTCTGCCTTTGTATTGGTCTCGTTTGTGTTCCTTGCTAACATATGGGGATATATTAACATGTGA 1776 0.4499 MGAVVDCYPPHAGEVAVLSLNSLPLGFRFRPSDEELVDYYLRQKINGNGEEVWVIREIDVCKWEPWDLPDLSVIRNKDPEWFFFCPQDRKYPNGHRLNRATTHGYWKATGKDRKIKSGSTLIGMKKTLVFYTGRAPKGKRTNWVMHEYRPTLKELDGTNPGQNAYVLCRLFKKQDESLEVSNCDEVEQTDSAPLAANYSPEEIQSDQAPAEVSPSQVTDDKHQGVIPEHSEEAVSNVITSADCHSDGYDACETQNQALELPAEDIPPINWDIFNDPEDKIFDDKLFSPIHSHIPPEFYYQANNETNIADILNSVNWDEISYEDPYSQTQNNFFHDVKQSISGSEPDAGVTNMTCIHPMNVVYPDEAIHRRVAMATTPQYCSNFTSDFSADEQKSNVSLIQNNSQMACFSDPRTGQVYNVFNDYRNLNTFASGDTGIKIRTRQVRNEQPAMNFPNQGNADRRIRLLKRRLNVSNKMKDVGVPEQEHDSKPITAEENKNKTSKTHTADESATANDVNERQEKTESTDKRNLITKQFGKGGSSMLGLKGLLRRRLGYISKASSNFKMWSCVVVASAFVLVSFVFLANIWGYINM 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91126g00002 591 MobiDBLite consensus disorder prediction 510 524 - -
Stsc91126g00002 591 SUPERFAMILY NAC domain 18 173 IPR036093 GO:0003677|GO:0006355
Stsc91126g00002 591 ProSiteProfiles NAC domain profile. 23 173 IPR003441 GO:0003677|GO:0006355
Stsc91126g00002 591 MobiDBLite consensus disorder prediction 476 503 - -
Stsc91126g00002 591 Gene3D NAC domain 32 177 IPR036093 GO:0003677|GO:0006355
Stsc91126g00002 591 MobiDBLite consensus disorder prediction 201 221 - -
Stsc91126g00002 591 MobiDBLite consensus disorder prediction 476 524 - -
Stsc91126g00002 591 FunFam Nac domain-containing protein 86 32 176 - -
Stsc91126g00002 591 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 22 245 - -
Stsc91126g00002 591 MobiDBLite consensus disorder prediction 201 220 - -
Stsc91126g00002 591 Pfam No apical meristem (NAM) protein 24 149 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91126g00002 Stsc-Chr91126 19982 23258 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91126g00002 15 464 NAC Transcription Factor Family AT4G35580 40.389 3.91e-96 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Stsc91126g00002 NAM 4.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91126g00002 - - gmx:100777071 665.996