Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91125g00004 ATGACCATGGAACCAAACCCAACACAAGATGCTCTTGACTGGCAGCTTGAAGGTTCTGCCTCTTTCTTCCCACCATTCTTGGATTATCCATATCCCATTCAAGATTATCACTTCTGGGATCAAAGCCAAGACATAATCTCCTACCATAACCAAATTGATCCTGCTACCGGATCCCTGGACACTGGAAACGGCGCTGCCGCCGTTGTGGCCACCACTGCCACCAGTACAACCTGCACAACACCCTCGGATCCTGAACCTTACAGTAGTTACAACAACCTACTGGTCTCCGACTTGCCCACGAAGAAACGAAACTCCCCCGGCGACAATGAATGTTCGGTCCAAAAGCCTTCACAAAACCATAGAGCCAAGAAATTCAAGTCTCGTTCAACTAATGAAGCTGACAATGGTGATTCAGTTGCTGAAGGAACTAGTGTTAGAAAATCCGGCGGCAACAAAAAAGGTGGAGGCAAGAACAATGGCAATAGCTGCAACAATGGAAACAAGGAAGGTAGGTGGGCAGAACAGTTACTCATCCCTTGTGCTTCAGCCATAACCGCTAGAAACTTGAACCGTGTGCAGCACCTATTGTATGTTCTCCATGAGCTAGCCTCGCCTACCGGAGATCCGAATCACCGGCTCGCGGCACACGGTCTCAGGGCACTGACAAACCATCTGTCATCATCATCATCATCTTCTACCACAAATTGTGCAACAACAACCGATTCAGGGACTAAGACTTTTGCATCAGTGGACTCCAAATTCTTCCACAAGGCACTCCTCAAGTTCTATGAGGCTAGCCCCTGGTTTTCTTTCCCTAATAACATAGCAAACGCTTCAATCCTTCAATTGCTTGCTGAAGAAGAATCAAGTAGCTCGCGCACTCTTCACATCCTTGACATTGGAGTCTCCCATGGTGTCCAATGGCCTACTTTTCTCGAGGCGTTAACCCGCAGACCCGGCGGACCTCCGCCTTTGGTTCGCCTCACCGTTGTAACCGCTTCTTCCAATGAAAATGAACAGAACATGGAAGCACCTTTCTCTGTTGGTCCTGCTGGTGATAACTCCTCTTCTTACCTCCTCGGTTATGCTCAAAGCCTTAAGCTCAATATGCAGATAAACACGATTGATAATCTCGAACTACAGAACTTGAATTCGAAGATTATCGACACATCTTCGGACGAAACATTCATTGTGTGCGCACAGTTTAGACTCCACCATTTGAATCACAGGAGCCCTGACGAGAGGAGCGAGTTCTTGAAGGCTTTGAGAAGCATGGAGCCTAAAGGGGTGATACTGAGTGATAACAACATGGAATGCAGCTGCAATGGGTGCGGGAGCTTCGCGGCGGGATTCTCCCGGAGAGTGGAGTACTTGTGGAGTTTCTTGGACTCGACGAGTGTGGCGTTCAAGGGGCGGGAGAGTGAGGAGAGGAGAGTGATGGAAGGGGAGGCGGCGAAGGCGCTGACGAACCAGAGGGAGATGAATGAAGGTAAAGAGAAATGGTGTGAGAGGATGAAGGAGGCAGGGTTCGTGGAGGGAAAGCTTGATGATGACACCATTGATGGAGCTAAAGCTTTGTTGAGGAAATATGATAATAACTGGGAGATGAAAGTTGAGGAGGGAAACAAGAGTGTTGGATTGTTCTGGAAGGATCAGGCTGTTTCTTTCTGTTGTTTGTGGAAGTTGGATGGGGGAGAAAATCAAGGTAGATCAAGCTCTACTTTGAATTCTCGTCTATAG 1740 0.4816 MTMEPNPTQDALDWQLEGSASFFPPFLDYPYPIQDYHFWDQSQDIISYHNQIDPATGSLDTGNGAAAVVATTATSTTCTTPSDPEPYSSYNNLLVSDLPTKKRNSPGDNECSVQKPSQNHRAKKFKSRSTNEADNGDSVAEGTSVRKSGGNKKGGGKNNGNSCNNGNKEGRWAEQLLIPCASAITARNLNRVQHLLYVLHELASPTGDPNHRLAAHGLRALTNHLSSSSSSSTTNCATTTDSGTKTFASVDSKFFHKALLKFYEASPWFSFPNNIANASILQLLAEEESSSSRTLHILDIGVSHGVQWPTFLEALTRRPGGPPPLVRLTVVTASSNENEQNMEAPFSVGPAGDNSSSYLLGYAQSLKLNMQINTIDNLELQNLNSKIIDTSSDETFIVCAQFRLHHLNHRSPDERSEFLKALRSMEPKGVILSDNNMECSCNGCGSFAAGFSRRVEYLWSFLDSTSVAFKGRESEERRVMEGEAAKALTNQREMNEGKEKWCERMKEAGFVEGKLDDDTIDGAKALLRKYDNNWEMKVEEGNKSVGLFWKDQAVSFCCLWKLDGGENQGRSSSTLNSRL 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91125g00004 579 MobiDBLite consensus disorder prediction 97 166 - -
Stsc91125g00004 579 ProSiteProfiles GRAS family profile. 164 561 IPR005202 -
Stsc91125g00004 579 Pfam GRAS domain family 174 561 IPR005202 -
Stsc91125g00004 579 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 153 551 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91125g00004 Stsc-Chr91125 21865 24064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91125g00004 2 561 GRAS Transcription Factor Family AT3G13840 49.030 2.96e-164 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc91125g00004 GRAS 2.2e-77 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91125g00004 - - mtr:11434050 698.738