Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91118g00004 ATGTCAATGGGGAAGGCATCAAAGTGGTTTCGCGGTCTTTTTAGTCCCAAGAAGCAACACCAACCACAACCGCAACCGCAACAACCACATCAAACTCCTTCGTATTCCGTAACTTCTTCTCCCAATCCAACTAAACACAAACGACGATGGACCTTCGTCAAATCATACAGAGAACACCACCACCACCAACAACAACACGTGGATCCTCCTTCCGCCGTCGATCCTGACAAGCACGCCATTGCTGTTGCTGCTGCTACGGCCGCAGTCGCTGAGGCTGCCGTCGCTGCAGCGCAGGCTGCTGCCGCCGTCGTCAGACTTACTAGCAGCAGCGGCAGGTCCGCCAACGCCGGAAGTGTGACCACCGTTAGTAGCCAAGTATGGGCCGCCGTTAAGATTCAATCCGCCTTCCGTGGATGTTTGGCAAGGAGAGCATTACGGGCACTGAAAGGATTAGTGAAGCTTCAAGCACTTGTGAGAGGCCACATTGTAAGGAAGAGAACAGCACAACAGATGAAAAAATGGCAAGCTCTTTTAAGAGCACAAGCTAGAGTTTGTGCTGGCAGAGTTCATATCCTCCAAACCCCTATTTCCACTTCTAAGTCATCTTCTACCTCCCACCTTCATGGGCCAGCAACACCAGAAAAGTTTGAAAGTCCAATCAGATCTAAAAGCATGAAACATGAGCATTCACCGTTACTTAAGAGAAATTGCTCCAAATCATGCCTCCAGCAGGTCCATGGTAGTAGTAGCCAAGAGAAATGTAGAAACAAATCAGAAAAAAACATAGATGACCTATCATGGAACCAAGAAAAATCATCAATCAGAACCTCTAGCACCATCAATGGTGACAAAAGCGACAAGAACCCTGACGCTGAAATTGATTCCAGAAGATCACATGCCACGTCATCATCAAGACGTAGGAGCCTCTTTTCCGCAACCATCAACAAGGAATCATCATCAGTGATATCTCTTCAATCAGGCCCAAGCCCATCTTTTGAGGTCCAGTCTCAGAGCCCAATTAAGCCCAATTGGGTTGAGGATAGCCCATTTTGCACAGCTGAAAACAGCCCTCAATACCTATCAGCATCTTCCAAAGATAATGGATCCAAAAGAAGCCCTTTTGGTGGGTCAAGGTCAAGGAGCTATATTTGTGACTATTCTGATTACCCAAGTTACATGGCATGCACTGAATCTTCAAAGGCAAAAGTGAGGTCTCTTAGTGCCCCAAAACAAAGGCCTAACCAATGTGATAGGTCAAGTTCATCTAATAGGTACTCACTCAATGGATTGGTCTCTCAGAGGCCCAATTATGCTTTGCAAGGAAGCTTCAACAACAAGGCTTATCCAGGTTCTGGTCGTTTGGACAAGCATGGAATGCCTGTGGGATATAGATTCTAA 1398 0.4678 MSMGKASKWFRGLFSPKKQHQPQPQPQQPHQTPSYSVTSSPNPTKHKRRWTFVKSYREHHHHQQQHVDPPSAVDPDKHAIAVAAATAAVAEAAVAAAQAAAAVVRLTSSSGRSANAGSVTTVSSQVWAAVKIQSAFRGCLARRALRALKGLVKLQALVRGHIVRKRTAQQMKKWQALLRAQARVCAGRVHILQTPISTSKSSSTSHLHGPATPEKFESPIRSKSMKHEHSPLLKRNCSKSCLQQVHGSSSQEKCRNKSEKNIDDLSWNQEKSSIRTSSTINGDKSDKNPDAEIDSRRSHATSSSRRRSLFSATINKESSSVISLQSGPSPSFEVQSQSPIKPNWVEDSPFCTAENSPQYLSASSKDNGSKRSPFGGSRSRSYICDYSDYPSYMACTESSKAKVRSLSAPKQRPNQCDRSSSSNRYSLNGLVSQRPNYALQGSFNNKAYPGSGRLDKHGMPVGYRF 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91118g00004 465 MobiDBLite consensus disorder prediction 244 377 - -
Stsc91118g00004 465 MobiDBLite consensus disorder prediction 196 231 - -
Stsc91118g00004 465 MobiDBLite consensus disorder prediction 267 284 - -
Stsc91118g00004 465 Pfam IQ calmodulin-binding motif 127 146 IPR000048 GO:0005515
Stsc91118g00004 465 Pfam IQ calmodulin-binding motif 152 166 IPR000048 GO:0005515
Stsc91118g00004 465 MobiDBLite consensus disorder prediction 285 301 - -
Stsc91118g00004 465 ProSiteProfiles IQ motif profile. 128 153 IPR000048 GO:0005515
Stsc91118g00004 465 MobiDBLite consensus disorder prediction 30 46 - -
Stsc91118g00004 465 Pfam Protein of unknown function (DUF4005) 356 428 IPR025064 -
Stsc91118g00004 465 MobiDBLite consensus disorder prediction 405 427 - -
Stsc91118g00004 465 MobiDBLite consensus disorder prediction 1 46 - -
Stsc91118g00004 465 MobiDBLite consensus disorder prediction 252 266 - -
Stsc91118g00004 465 MobiDBLite consensus disorder prediction 304 376 - -
Stsc91118g00004 465 ProSiteProfiles IQ motif profile. 149 176 IPR000048 GO:0005515
Stsc91118g00004 465 Gene3D - 124 178 - -
Stsc91118g00004 465 PANTHER IQ-DOMAIN 5-RELATED 3 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91118g00004 Stsc-Chr91118 28510 33516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91118g00004 3 465 IQD Protein Family AT4G23060 42.214 2.28e-70 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91118g00004 - - ahf:112805329 692.96