Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91109g00002 ATGGGGATGAGGAGCAATAACAACAATAATAATAATGCAGGAGGAGGAGGAGAAATTGTTCAAGTGGAAGGGGGCCACATTGTTAGGTCCACAGGGAGAAAAGACCGCCACAGCAAGGTCTACACCGCTAAAGGACCACGCGATAGAAGGGTTAGGCTCGCCGCCCACACCGCCATCGAATTCTACGACGTTCAGGACCGCCTCGGCTACGACCGCCCTAGCAAGGCCGTCGATTGGCTCATCAAGAAAGCTAAGCACTCCATCGACAAGCTAGCCGAGCTTCCTCCCTGGCAGCCACCGCCCTCCGCTCCCCCGCCGCAGCAAGACGAGGAAGATGAGGAAGTGGCGGAGCAGAATAATCAAGAAAATAGTAATATTATTAATCAGCAGTACCATACGCCTTCACACTTCGTTCAGATTCAGACAAACCAGCACCATCAGCAACAAAACATTGAAACTGATCCCATAGCTTTCTTTCCTACAACCTCATCTACTCTCTCTATGAATTTCCAAAACTACCCTCACGAGATGATTTCAAGAACCGGTGGCAACAACAACGTGAATCCCATTACAGAAGATCTTGGACTTTCACTCCACTCGTTTCAACAACCACCTTCAAATCAACATCAAGGTACTCTCTTTGGTGCTGCTGGATCCAGTAACAACGTTGGATTTGAGAGCCATTACCAGAAGATTGTAGCTTGGAACAACGAAGCTGCTACCATGGATATCAATAGGGTAGGGTTCATGGTAAACCCGCAGCATCATCATCCATTTCTGAGTGGGACCACCCTTCCGTCGAGCTTTCCACCACCATCGCTTAGATCTTGGAGCGAAATTCCGATGAACCCAAACTCCGACGAAGACAGCAGGCCACAACAACAACAACAACCGATTCATAATAATCATCGTCCTTTATTTGAAAGCAGGTTTCTTTCAGATGGATTAGCAGGAGCAGCAGGGTTTCGCATTCCAGCTAGAATTCAAGGGGACGAGGAAGAGAACCACCATGGACATGGAGTAGTTGCTTCTACCAGCACTCCATCTTCTGCTTCTCCTCATTCTCACCACTGA 1074 0.4842 MGMRSNNNNNNNAGGGGEIVQVEGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLAAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKHSIDKLAELPPWQPPPSAPPPQQDEEDEEVAEQNNQENSNIINQQYHTPSHFVQIQTNQHHQQQNIETDPIAFFPTTSSTLSMNFQNYPHEMISRTGGNNNVNPITEDLGLSLHSFQQPPSNQHQGTLFGAAGSSNNVGFESHYQKIVAWNNEAATMDINRVGFMVNPQHHHPFLSGTTLPSSFPPPSLRSWSEIPMNPNSDEDSRPQQQQQPIHNNHRPLFESRFLSDGLAGAAGFRIPARIQGDEEENHHGHGVVASTSTPSSASPHSHH 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91109g00002 357 MobiDBLite consensus disorder prediction 340 357 - -
Stsc91109g00002 357 Pfam TCP family transcription factor 32 148 IPR017887 -
Stsc91109g00002 357 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 27 303 IPR005333 GO:0003700
Stsc91109g00002 357 MobiDBLite consensus disorder prediction 92 120 - -
Stsc91109g00002 357 ProSiteProfiles TCP domain profile. 33 91 IPR017887 -
Stsc91109g00002 357 MobiDBLite consensus disorder prediction 262 298 - -
Stsc91109g00002 357 MobiDBLite consensus disorder prediction 325 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91109g00002 Stsc-Chr91109 29580 30653 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91109g00002 1 357 TCP Transcription Factor Family AT1G53230 38.806 6.13e-59 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc91109g00002 TCP 3.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91109g00002 - - gmx:100814907 262.692