Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91102g00003 ATGGAAGGGAGAGGGGTGAGGCAATGTGTCATTGCTTGGGAAATGACTAAGTTACATGAAGAGTTTTGGCGTGGTACAGTAAGAGAGGCCAACGAAGTGTTTTTTATGCGGAAGCCAAAGGGAGAACCAACCATATTGATTGAAGGGCAAACAAGTTATAAAGCAGAATCTCCATCAGACAGTGAGCCTGAAGATGAACTAAGAGAATTGATTGCAAGCGGCGAGAGTCTATCCACGGCTGTGAAATTGGTTGCTGGCAGAACATCCACGAGTAAAAAGACTATATATTCACTTGCATCAAGTAGAAGACGATTCAAACTAATGCCAACTTCTCATGTTTTCCAAACTCAGGTTGCTGACCTTAGAAAAAACCTGAATGTTGTGAATGCGCTGCCGCAGATTAGAAGCTCTGTCAAATTTAAGAGAGTTATGCAAACCATATTTTCACTGGGCAATGCTTTGAAGCAGGGAATTCCTAGGGTTGACAGCCTTGGATCACATATTTTTTCAAAGAGGTGGTGGTGGTGTTGTTGTTGCTGCTCATGTTCCCGAGAGAGTTGA 561 0.4296 MEGRGVRQCVIAWEMTKLHEEFWRGTVREANEVFFMRKPKGEPTILIEGQTSYKAESPSDSEPEDELRELIASGESLSTAVKLVAGRTSTSKKTIYSLASSRRRFKLMPTSHVFQTQVADLRKNLNVVNALPQIRSSVKFKRVMQTIFSLGNALKQGIPRVDSLGSHIFSKRWWWCCCCCSCSRES 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91102g00003 186 Gene3D - 2 53 IPR014776 GO:0008168
Stsc91102g00003 186 PANTHER RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE I 7 104 IPR008189 GO:0008168
Stsc91102g00003 186 SUPERFAMILY Formin homology 2 domain (FH2 domain) 97 162 - -
Stsc91102g00003 186 Gene3D Formin, FH2 domain 54 169 IPR042201 -
Stsc91102g00003 186 SUPERFAMILY Tetrapyrrole methylase 7 47 IPR035996 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91102g00003 Stsc-Chr91102 20600 23334 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91102g00003 114 170 FH2 protein (formin) Gene Family AT3G32400 50.000 5.25e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91102g00003 K07056 - gmx:100819709 127.102