Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91101g00004 ATGGGACACGAAACCCAAAAGCTACTAGATGAATACGACGTGTCAGAGATTCTAGGAAGAGGGGGATTCTCTGTTGTTAGGAAAGGCATAAAAAAGTCAAGCAATGATGAGAAAAATCATGTTGCCATAAAGAAATTAAGAAGAGTAAGTGCCTCTACTTCAACCCCTAAAGAGAGGAGCAACTTGGTTTTCTCTGCTTGGAGACCGGTTTCAGTGTCAGATGCTCTTCTCACCAATGAGATCCTTGTGATGAGGAAGATAGTCGAAAATGTTTCACAACATCCAAACGTGGTTGACCTCTATGATGTCTATGAGGACTCGAATGGTGTTCATCTTGTTTTGGAGCTGTGTTCTGGTGGTGGACTTTTTGATCGCATTGTAGCACAGGATAGGTACTCGGAGACTGAGGCTGCAACAGTTGTTAGCCAGATTGCGGCAGGCTTAGAGGCTATTCACAAAGCCAACATTGTCCATAGAGACTTGAAGCCTGAGAATTGCTTGTTCTTGGGCAAGAGGAAGGACTCTCCTCTAAAGATCATGGACTTTGGTTTGAGCTCTGTTGAAGAGC 568 0.4401 MGHETQKLLDEYDVSEILGRGGFSVVRKGIKKSSNDEKNHVAIKKLRRVSASTSTPKERSNLVFSAWRPVSVSDALLTNEILVMRKIVENVSQHPNVVDLYDVYEDSNGVHLVLELCSGGGLFDRIVAQDRYSETEAATVVSQIAAGLEAIHKANIVHRDLKPENCLFLGKRKDSPLKIMDFGLSSVEE 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91101g00004 189 PANTHER SERINE/THREONINE-PROTEIN KINASE 7 186 - -
Stsc91101g00004 189 ProSiteProfiles Protein kinase domain profile. 12 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91101g00004 189 Pfam Protein kinase domain 12 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91101g00004 189 ProSitePatterns Protein kinases ATP-binding region signature. 18 45 IPR017441 GO:0005524
Stsc91101g00004 189 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Stsc91101g00004 189 SMART serkin_6 12 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91101g00004 189 Gene3D Transferase(Phosphotransferase) domain 1 2 189 - -
Stsc91101g00004 189 SUPERFAMILY Protein kinase-like (PK-like) 4 186 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91101g00004 Stsc-Chr91101 30264 36087 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91101g00004 11 185 EF-hand Containing Proteins AT3G57530 40.571 9.11e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMK1-DCAMKL Stsc91101g00004 Pkinase 5.9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91101g00004 K13412 - gmx:732616 291.197