Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91100g00003 ATGGGGGAAGGTGAAGGAGGAGGGGGTGATTCTGTTTCCAAGACTGTGACGTCATCCATGGATGCTGCTGTAACGGCGCCGGTGGATGCTCCTACGGGGAAGAAGCTCGCCCGGCAGCTCGATTTTACGGCCTTGCCGGAGAAAAAATCGCAACAGCAACTGCAACAGCGATTGCATTCCCAGGTTCAGGTGCAGCAGCAGCAGCAGATTGTGGCTCCGGTGATAGCGGCGCAGCCACAGATTGTGGCACAGCCGTCGGTGGTTGTAAAGCCGGTTCCTCCGCTGCCGGCACCTGCGGTGAGAGCAGGGAAACCAGATTCTCCAAAATCAAGATCAAGACCTAACTTTGATATAAAGGAAGCTACTCCAAAGAAGCAAAAGCAGTGCAATTGTAAACACTCTAAATGTTTAAAGCTATATTGTGAATGTTTTGCATCTGGAATATATTGCGATGGTTGCAACTGTGTAAATTGTTTCAACAATGTCGAAAATGAGGCTGCTAGACGAGAAGCTGTTGAAGCTACTCTAGAGCGCAATCCAAATGCATTTAGGCCAAAAATTGCGAGCAGTCCCCATGGAGCACGAGACAGCAGGGAGGAGGCTGGTGAAGTTCTGATATTAGGAAAGCATAACAAGGGTTGCCATTGCAAGAAATCGGGGTGTCTCAAGAAGTACTGTGAATGTTTCCAAGCCAACATCCTTTGTTCTGAAAATTGTAAATGCATGGACTGCAAGAATTTTGAGGGAAGTGAAGAGAGACAGGCCTTGTTTCATGGAGATCAAAATAACATGACATATATTCAGCAGGCAGCAAATGCTGCCATAACTGGAGCAATTGGTACATCTGGTTATTCATCGCCTCCAGTAACCAAGAAAAGAAAAGGTCAGGAAATCTTCGTTGGGCAAACACCCAAGGAACCATCCATTAGCAAGTTGGGACAACAGGTAAACCATGTCCGAAGTCCAGCTCCATCCCCATCCTTGCCGTCCCTTCCAGGCACTCGTGCTGGAACTGCAACACTAGGTCCTTCAAAATTTTCATACAGGTCTCTTTTAGCAGACATCATACAACCACAGCACTTGAAAGAGCTCTGCTCAGTTTTGGTGCTGCTATCTGGACAAGCTGCAAAGACACTTACAGACCAGAAAAATTTAATGGAAAAGCATACAGAAGATCAGACAGAAACTTCGCTCGCCTCTTCAAATCAGTCACAATTACCAAATCAAAAGGAAGGTGATGTTGAGAAAGCTATGGCTGATGATTGTTCGAGTGCAAACCAAACAGATAAAATCAGCTCGGACAATTCAAGTTCGGATGGCGCTGACGTCCCGAAAGGGAGGCCAATGTCTCCCGGGACTTTAGCTTTGATGTGTGACGAGCAAGATACGTTCATGACAGCTGCCTCTCCAGTTGGCACAATCGCACACGGCTGCAACACATCCTCACAATTTCCTTACGGACAAGGAATGACAGAGGTCTATGCTGAGCAAGAAAGGATTGTATTAACAAAGTTTAGGGATTTCCTTAATAGAGTGATCACCATGGGAGAAATAAACGAAACGAAGTGTTCGTCGTTAGCTAGAAGTGAATTGGAGAGCCAGAAGGATCCAATCAATAATGGCCCTGGAAATACGACTACCGAGAGTTCGCATCAGCAGGGTGCCACTAGCAATGGCATCGCCAAATCCGTTGTTCCACCTACGGCCGCAGCAGCTTCAGCTCCACCGGCCCCTGGCCATAATAATGTTCCTGAAAATGGAGAAAATAAGCAGAACAGCGAAAAATAG 1788 0.4687 MGEGEGGGGDSVSKTVTSSMDAAVTAPVDAPTGKKLARQLDFTALPEKKSQQQLQQRLHSQVQVQQQQQIVAPVIAAQPQIVAQPSVVVKPVPPLPAPAVRAGKPDSPKSRSRPNFDIKEATPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCFNNVENEAARREAVEATLERNPNAFRPKIASSPHGARDSREEAGEVLILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNMTYIQQAANAAITGAIGTSGYSSPPVTKKRKGQEIFVGQTPKEPSISKLGQQVNHVRSPAPSPSLPSLPGTRAGTATLGPSKFSYRSLLADIIQPQHLKELCSVLVLLSGQAAKTLTDQKNLMEKHTEDQTETSLASSNQSQLPNQKEGDVEKAMADDCSSANQTDKISSDNSSSDGADVPKGRPMSPGTLALMCDEQDTFMTAASPVGTIAHGCNTSSQFPYGQGMTEVYAEQERIVLTKFRDFLNRVITMGEINETKCSSLARSELESQKDPINNGPGNTTTESSHQQGATSNGIAKSVVPPTAAAASAPPAPGHNNVPENGENKQNSEK 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91100g00003 595 MobiDBLite consensus disorder prediction 395 410 - -
Stsc91100g00003 595 ProSiteProfiles CRC domain profile. 125 249 IPR005172 -
Stsc91100g00003 595 MobiDBLite consensus disorder prediction 421 440 - -
Stsc91100g00003 595 MobiDBLite consensus disorder prediction 301 338 - -
Stsc91100g00003 595 MobiDBLite consensus disorder prediction 386 454 - -
Stsc91100g00003 595 MobiDBLite consensus disorder prediction 527 595 - -
Stsc91100g00003 595 MobiDBLite consensus disorder prediction 527 563 - -
Stsc91100g00003 595 MobiDBLite consensus disorder prediction 307 324 - -
Stsc91100g00003 595 SMART CXC_2 124 164 IPR033467 -
Stsc91100g00003 595 SMART CXC_2 209 250 IPR033467 -
Stsc91100g00003 595 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 212 246 IPR005172 -
Stsc91100g00003 595 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 126 161 IPR005172 -
Stsc91100g00003 595 PANTHER TESMIN/TSO1-RELATED 47 518 IPR028307 -
Stsc91100g00003 595 MobiDBLite consensus disorder prediction 97 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91100g00003 Stsc-Chr91100 21901 28117 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91100g00003 34 532 CPP Transcription Factor Family AT4G29000 57.443 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Stsc91100g00003 TCR 3.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91100g00003 - - gmx:100818116 809.29