Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91092g00002 ATGGCCGTCTCGAACGGAATTGAAGTAGAAGCCGTTCTCCACTTCCTCAGACAGAACGGTCTCTCTCAAGCTGAATCCGCACTCAAACAAGATATCATCGAAAAGAATGGAGATGATAGTTCCGATTCTCTTCATCATCATGCTCAACCTGAAAACCTTCTTCGATCCTTCGATTACGAGAAGTTCTTCTTTCCAATGGTTCCTCCTCCGCCGCCGCTCAAGCTCCGATCCGTTTCTCGCTTGCCGGAGGATCGTGCTACCGCCGCCGCCGGAACTTGCTCTGTTTCCTCGGATGACGACTTTGTAACTATAGCTTCATCTACTTCTCGTGCTCCTTCTTCAGAATTCATCAATCCATATGGAATTAGTTCCTTGTCTCAAACTCAAAATGATTCTGAATCCTCATCTGATAGAATGTCTCAGTTTGGCACAGCGCGTGACTATCATGATTTCGACATGCAAAATGAACCATATTGGTATAATGAAAAGGACGAAGACTATTTCATGACTCCGAATTTCGAAGGGCCTGATTTCTTTGAGAACCAAAGTGAGGATAAGTTTGTCATGACAGCAGAAATGGAAAACCAACATGACAATCATCTTAGTCTTGCTTTATACCACAAAGAATTTCGGTTAGAGGGAGATGAATCAAATGATAGTTACATGGACAAGGTATGCCTTTATAATCATTCCCCTGTAAGGGATGGAAATTCAACTTATTCAAAAGGCTATAGTCAAGTGGATGATAACAAAGAGTTTGAAGCTGAATCGGAAGGTAAGACCGAGAAACAAATCGTATCCTATGGTTGTGAGGTTCCATTTTGCAAAGGCTGTAATGGTTCAGAAGAGCCTTGTAGCGGGGATCCTACGAACTTCAGCTATCCTAGTTTGAAGGAGATTCATCTTAATGATTTTCATTTGAAGGTTGTTGGAGATATTAGCTATTTTGATTCAGCTCTTGAGCATGGTGAGAATGGAAGTTTCAACTACTCCGCTAAAAAGGAAAGAAGTGAAGGCTACAAGGATCCATTTGACATTACTATCAAAGTTGCTGAAACAGATCTACCAAATGGAGGTGACAACTATGAAGCCCGAGACGGTGGGGATTTCAACGAAGAGTGCCAAGATCCAGATATTGCTGCAGATGGAGAGGTTGCTACTGATGACGAGCTCTTAAAGTACACTCAAGAGGATGAATATGAAGTATTTGACCTGAGAATTATACACAGAAAGAACAGGACTGGATTTGAGGAAAATAAGGAATTCCCAATTGTGCTGAATACTGTCATAGCCGGCAGGTACTATGTAACGGAGTATCTTGGTTCAGCTGCCTTCAGTAGGGTTGTCCAGGCTCACGATCTTCATACGGGAATAGACGTTTGCTTGAAGATTATTAAAAATGACAAAGACTTCTTTGATCAAAGCCTAGATGAAATCAAGCTTCTGAAACTTGTCAATAAGCATGATCCAGCCGATCAATGCCACATATTGCGTCTTTATGATTATTTTTACCATCAGGAACATTTGTTCATTGTAACCGAGCTTCTTCGAGCAAACTTATATGAATTTCAAAAATTCAACGAAGAATCTGGAGGAGAAGCATATTTTACATTGAGTAGGCTACAGCTCATTACTCGTCAGATTTTGGAGGCTTTGCACTACTTGCATAACTTGGGAATCATTCACTGTGACCTGAAGCCAGAAAATATTCTAATCAAAAGTTACAAAAGATGCGAGATTAAGGTTATTGATCTCGGAAGCAGTTGCTTTCAATCTGACAATCTATGCCTATATGTACAATCCCGATCCTATAGAGCTCCTGAAGTTATGTTAGGCCTTCAATATGACGAAAAAATCGACATATGGTCTCTCGGATGCATCTTAGCTGAGCTATGCTCTGGTGAAGTGCTCTTTCCAAACGATGGAGTTGTAATGATTCTGGCGCGCATGATTGGAATGATTGCTCCTATTGATCTAGAGATGTTGCTTAAAGGGCAAGATACACACAAGTACTTCACCAAAGAATATGATATTTATTATGTAAACGAGGAGACTGATCAATTGGAGTACATAATTCCAGAGGAATCATCATTAGAGCAGCACCTACAAGTTTCTGATACAATGTTTATAGATTTTGTAAGATACTTGCTTAGCATCAACCCTAAAAGAAGACCTACTGCAAGACAAGCACTAAAGCATCCATGGCTTTCCTATGTTTACAAGTCCAATTAG 2232 0.405 MAVSNGIEVEAVLHFLRQNGLSQAESALKQDIIEKNGDDSSDSLHHHAQPENLLRSFDYEKFFFPMVPPPPPLKLRSVSRLPEDRATAAAGTCSVSSDDDFVTIASSTSRAPSSEFINPYGISSLSQTQNDSESSSDRMSQFGTARDYHDFDMQNEPYWYNEKDEDYFMTPNFEGPDFFENQSEDKFVMTAEMENQHDNHLSLALYHKEFRLEGDESNDSYMDKVCLYNHSPVRDGNSTYSKGYSQVDDNKEFEAESEGKTEKQIVSYGCEVPFCKGCNGSEEPCSGDPTNFSYPSLKEIHLNDFHLKVVGDISYFDSALEHGENGSFNYSAKKERSEGYKDPFDITIKVAETDLPNGGDNYEARDGGDFNEECQDPDIAADGEVATDDELLKYTQEDEYEVFDLRIIHRKNRTGFEENKEFPIVLNTVIAGRYYVTEYLGSAAFSRVVQAHDLHTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPADQCHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNEESGGEAYFTLSRLQLITRQILEALHYLHNLGIIHCDLKPENILIKSYKRCEIKVIDLGSSCFQSDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDGVVMILARMIGMIAPIDLEMLLKGQDTHKYFTKEYDIYYVNEETDQLEYIIPEESSLEQHLQVSDTMFIDFVRYLLSINPKRRPTARQALKHPWLSYVYKSN 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91092g00002 743 ProSiteProfiles Protein kinase domain profile. 434 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91092g00002 743 SUPERFAMILY Protein kinase-like (PK-like) 422 739 IPR011009 -
Stsc91092g00002 743 MobiDBLite consensus disorder prediction 116 141 - -
Stsc91092g00002 743 Gene3D Transferase(Phosphotransferase) domain 1 488 736 - -
Stsc91092g00002 743 SMART serkin_6 434 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91092g00002 743 Pfam Protein kinase domain 436 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91092g00002 743 PANTHER DUAL SPECIFICITY PROTEIN KINASE 129 736 - -
Stsc91092g00002 743 FunFam Putative serine/threonine-protein kinase dyrk2 428 515 - -
Stsc91092g00002 743 Gene3D Phosphorylase Kinase; domain 1 429 515 - -
Stsc91092g00002 743 ProSitePatterns Serine/Threonine protein kinases active-site signature. 560 572 IPR008271 GO:0004672|GO:0006468
Stsc91092g00002 743 CDD PKc_DYRK_like 434 736 - -
Stsc91092g00002 743 FunFam Serine/threonine-protein kinase ppk15 513 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91092g00002 Stsc-Chr91092 33158 38299 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91092g00002 431 731 MAP Kinase Gene Family AT5G19010 30.841 6.39e-33 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Stsc91092g00002 Pkinase 1.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91092g00002 - - adu:107457629 1329.31