Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91085g00009 ATGGACACACCGCCACCGCCACCAGCGCCACCGCCGTGGCAGGATGATCTTGCCGACGACCTCCAGTCACTGAGCTTCGCCTCCACCGCCACCACCACAACCACCGCTGACATCAAGCGCAGTACAAGCTTCGGCTCCGAAACCACCACACTGACGGCCTCCACCTCCGCCCGCATCCCACTGCCTCCGACGAAGCCTCACGCCCCTTCCTCCGACCCCCGCTGGTCCGCAATCCACCGGATCCGATCCTCCTCCGACGACTCCGCCTCCTCCGGCCGCATCCTACTCCCGTCAGACCTAGTGTTCTCCCGGCGCCTCGGCTCCGGCGACATCAGCTCCGTGTACCTGGCAGAGCTGAAGGCCTCTTCGAACGTAACGTTCGCAGCGAAGGTGATGGACAAGAAGGAGCTAGCGAGCAGGAGCAAGGAAGGGAGAGCGAGGACAGAAAGGGAAATTCTGGAGTTGTTGGATCATCCTTTCTTGCCGACGTTGTACGGCGCCATCGAGGCACCTAAATGGCTGTGCCTCCTCACAGAGTTCTGCCCCGGCGGAGACCTCCACGTGCTCCGGCAGCGCCAGCCAAACAAACGGTTCAACGAAGGCGCCGTCAGGTTCTACGCCTCAGAAGTGTTGGTGGCACTTGAATACCTTCACATGCTGGGGATAGTCTACCGTGATCTCAAGCCCGAGAACGTGCTGGTTCGATCTGACGGCCACATCATGCTCACTGACTTTGACCTCTCCTTAAAATGTGATGAATCCACACCAACGGCTCAGATCATCTCTGATCAAAAGAACTCTCCTCATATAGTCCTACAAAAGNNNNNNNNNNTCCTCTCAATTCACATCGTCCTCATGCATACTACCAAACTGTATAGTCCCCGCAGTGTCATGTTTCCACCCAAAGCGCAGGCGAAAGAAGAAGAAGCAAGGCCATCATGGTGGGCCCGAGTTCGTGGCCGAGCCCATGGATGTCCGGTCCATGTCATTTGTTGGGACTCACGAGTACCTGGCCCCGGAGATTGTGTCCGGTGA 1035 0.5758 MDTPPPPPAPPPWQDDLADDLQSLSFASTATTTTTADIKRSTSFGSETTTLTASTSARIPLPPTKPHAPSSDPRWSAIHRIRSSSDDSASSGRILLPSDLVFSRRLGSGDISSVYLAELKASSNVTFAAKVMDKKELASRSKEGRARTEREILELLDHPFLPTLYGAIEAPKWLCLLTEFCPGGDLHVLRQRQPNKRFNEGAVRFYASEVLVALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDESTPTAQIISDQKNSPHIVLQKXXXXLSIHIVLMHTTKLYSPRSVMFPPKAQAKEEEARPSWWARVRGRAHGCPVHVICWDSRVPGPGDCVR 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91085g00009 344 ProSiteProfiles Protein kinase domain profile. 100 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91085g00009 344 FunFam serine/threonine-protein kinase D6PKL2 99 184 - -
Stsc91085g00009 344 MobiDBLite consensus disorder prediction 1 28 - -
Stsc91085g00009 344 PANTHER FLIPPASE KINASE 1-RELATED 39 284 - -
Stsc91085g00009 344 Gene3D Phosphorylase Kinase; domain 1 100 184 - -
Stsc91085g00009 344 SMART serkin_6 100 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91085g00009 344 FunFam serine/threonine-protein kinase D6PK-like 185 252 - -
Stsc91085g00009 344 Gene3D Transferase(Phosphotransferase) domain 1 185 269 - -
Stsc91085g00009 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Stsc91085g00009 344 Pfam Protein kinase domain 103 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91085g00009 344 SUPERFAMILY Protein kinase-like (PK-like) 89 257 IPR011009 -
Stsc91085g00009 344 MobiDBLite consensus disorder prediction 57 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91085g00009 Stsc-Chr91085 26734 31537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91085g00009 12 269 AGC Kinase Gene Family AT3G44610 62.547 4.62e-96 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Stsc91085g00009 Pkinase 7.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91085g00009 K08286 - gmx:100792738 360.533