Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91085g00006 ATGGAGAAAACCTTGGGGTTCTTGTTCTTCGCGTTCACTGTCCTCTTCAGTGTGTTCTCCTTCCTTTTATTCCTCTTGAGGATGAAGCCATGGTGCAACTGTCAAACCTGCAGGACCTACACCACAATGAGTTGGACCACCCAATTCCCAAACCTCTCCGACTGGTACACTCATCTCCTCCGTGACTCCGCCACCGGAACCATCCACATCCATGTCTTGGGCAATATTGTAACTTCAAACCCCACCAACGTTGAGCACATGCTCAAGACGCGCTTCCAAAACTACCCCAAAGGGAGGCCCTTCTCAGCCATACTCGGCGATCTCTTGGGCCGCGGGATCTTCAATGTTGACGGAGGCCCGTGGATGTTTCAGAGGAAGATGGCCAGCCTTGAGCTCGGGAGCGTGGCGGTTCGAACCTACGCGCTGGAGATTGTGACGGAGGAGATACGGACGAGGCTCCTTCCTCTCATGGCTTCTTCGGTTGCATGTCCTCAAAACCACCAGGATAGTGTGATAGATTTACAAGACATGTTGCGACGTTTCTCGTTCGACAACATTTGCAAATTCTCCTTCGGCTTGGACCCACGTTGTCTCCTACCATCCCTACCGGTTTCGCCCTTCGCCGTCGCTTTTGACACGGCCTCCAAGCTCTCGGCGGAGCGTGCAATGACAGCATCGCCAATGATATGGAAGATCAAGCGCCTTCTTAACATTGGATCCGAAAAGAAGCTGAAGCAAGCCATCAGCACCATTAACAACTTAGCAGAAGATCTCATAAACAAGCGCAGGCAAATGGGATTCTCCACAAGAAACGATCTTCTCTCAAGGTTCATGACCTCTGTCGGAGACGACAACAACTACCTCAGAGACATAGTCGTTAGTTTCCTATTGGCCGGTCGCGACACTGTTGCCGCCGCGTTAACCGGTTTCTTTTTCTTGTTGTCCAAGTATCCAAGAGTTGAGGTGCTGATCCGGGAAGAATTGAACCGGGTCATGGAGAACCCGGCCCAGGAATGTGCGAATTTCGACCAGCTGCGGCAAATGCATTATCTGAGTGCTGCGGTTCACGAGAGCATGAGGCTGTTTCCGCCGGTTCAGTTTGACTCAAAATTCGCGCAAGAGGATGACGTGTTACCGGATGGTACATTTGTACCCAAGGGTACAAGGGTCACATACCATCCGTATGCAATGGGTCGGATGGAACGGGTTTGGGGACCCGATTGTCTCGAATTCAAACCCGAGAGATGGTTGAAGGATGGTGTATTTGTGCCGGAGGATCCATTCAAATACCCGGTTTTTCAAGCCGGGGTTAGGATTTGTTTGGGAAAAGAGTTGGCCCTAGTAGAGATGAAATCCGTGGTGGCTGCATTGGTTAGGCAATTTGACATTCGGGTAGTTGGGTCTGGTTTGGAGCCCCGGTTTGTAGCGGGTCTCACGGCGACGCTACGGGGCGGGTTATCCGTTCAGGTTTATGAGAGAAGTCGTGGGTGA 1491 0.5164 MEKTLGFLFFAFTVLFSVFSFLLFLLRMKPWCNCQTCRTYTTMSWTTQFPNLSDWYTHLLRDSATGTIHIHVLGNIVTSNPTNVEHMLKTRFQNYPKGRPFSAILGDLLGRGIFNVDGGPWMFQRKMASLELGSVAVRTYALEIVTEEIRTRLLPLMASSVACPQNHQDSVIDLQDMLRRFSFDNICKFSFGLDPRCLLPSLPVSPFAVAFDTASKLSAERAMTASPMIWKIKRLLNIGSEKKLKQAISTINNLAEDLINKRRQMGFSTRNDLLSRFMTSVGDDNNYLRDIVVSFLLAGRDTVAAALTGFFFLLSKYPRVEVLIREELNRVMENPAQECANFDQLRQMHYLSAAVHESMRLFPPVQFDSKFAQEDDVLPDGTFVPKGTRVTYHPYAMGRMERVWGPDCLEFKPERWLKDGVFVPEDPFKYPVFQAGVRICLGKELALVEMKSVVAALVRQFDIRVVGSGLEPRFVAGLTATLRGGLSVQVYERSRG 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91085g00006 496 PANTHER CYTOCHROME P450 26 486 - -
Stsc91085g00006 496 Gene3D Cytochrome P450 41 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91085g00006 496 Coils Coil 244 264 - -
Stsc91085g00006 496 CDD CYP86A 70 486 - -
Stsc91085g00006 496 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91085g00006 496 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91085g00006 496 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91085g00006 496 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91085g00006 496 Pfam Cytochrome P450 76 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91085g00006 496 SUPERFAMILY Cytochrome P450 52 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91085g00006 496 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91085g00006 496 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91085g00006 496 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91085g00006 496 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91085g00006 496 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91085g00006 Stsc-Chr91085 16843 19299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91085g00006 22 494 Cytochrome P450 AT2G27690 62.762 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91085g00006 K20624 - gmx:100813091 731.48