Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91078g00001 ATGGCTTACATGTGTGCAGACAGTGGAAACCTCATGGCCATTGCACAGCAAGTCATCAAGCAGAAGCAGCAACAAGAGCAACAACAACACAACCACCATAGTCATAACCACCATCTCCACCATCACCACCACCACCAACAGCAGCAGCAGCAGCAGCACCAGCACCAGCAACACTTACTGGGTATTTCTCCTCTTTCTCTTCATCCATGGAACAATACACCTCCTTTGGGGTTCCCTCTCACACCTACCAATGATTTCTCTGACCCGTTTCAAGTCGGGGCGGGACCCGATAACCCGGATCCAGGTTTTCACTTCCCTCCTCCTTTGGAGCCTCATTCTTCTTCTTCCTTCAGGTTCTCTGATTTTGCCGCCGCTACTTTTGATTCCGATGAGTGGATGGACACTCTCATGGCAACCGCTGCCGGAGATTCGACGGACACGTCAACCATCCCGGCGGCGGCGGCAGCGGCGTGGCACAACGGTAATTCCGATTTCGGACTCTACGGTTCTAGCCCGTTTACTACTTGTCCGACCCGTTTGTCACCGACTTCGGATCTCAACAGAGTGATATTCTCGTCGGAACCTCACACCGCCGCCGTGACAGCCACCGCGGCGGTGGCAGATACCGGTGTATCTCTCCAACAGGGTCAGCTTCCGGCCACGTGGGCAACCCCTCCGCCGCTTCCTCCGCCAACCGCCGTCAAAGAGCCTCCGAAAATTACACCGTCGTCTCCGCCGGCACCACCGCAGGCTCCGGCGACAGTCCAAGGCGGGTTGCCGAGCTTGCCTGAGCCTGATTCATCGCACCCGCTTCTGAAAGCGCTAACAGAGTGCGCTCTGTTTTCAGAAACGGAACCGGATCAAGCTTCAGAGTCTCTGAGCCAGTTGAGAAAATCGGTGTCCCAAAACGGAAATCCAATCCAAAGAGTTTCCTTTTACTTCGCCGAAGCTTTAAACCGAAAACTATCTTTTCAAATGGAGAAAGATAAGAACTTGGCAATGGTGGAAGCTGCTTCCACAGCCACTACTTCTGAGGAGCTAACAGTGTGTTACAAGGCTTTGAATGATGCTTGCCCTTATTCAAAGTTTGCACATTTAACTGCAAACCAAGCTATTCTTGAAGCCACTGAAGGAGCTTCAAGGATTCACATCGTTGATTTTGGGATTGTTCAAGGGATTCAGTGGGCTGCACTTTTGCAAGCATTTGCTACACGCTCTTCTGGGAAGCCTGACAGCATAAGGATCTCAGGGATACCAGCTATGGCTCTTGGAACTTCCCCTTCTGCTTCACTCAGTGCCACTGGAAATCGGTTATCAGAGTTTGCCAAGCTTCTTGAGTTGAACTTTGAGTTTAGGCCTATTCTGACCCCTATTCATGAGCTTAATGAGAGTAGCTTTTGTGTTGATCCAAACGAGGTCTTGGCTGTGAACTTCATGCTTCAGTTGTACAATCTTCTTGATGAAACCCCAGATGCTGTTGAGGCTGCACTTCGTTTGGCTAAGTCATTGAGGCCTAAGATTGTGNNNNNNNNNNTCTTGGTGAGTATGAAGCTAGTTTGA 1560 0.5045 MAYMCADSGNLMAIAQQVIKQKQQQEQQQHNHHSHNHHLHHHHHHQQQQQQQHQHQQHLLGISPLSLHPWNNTPPLGFPLTPTNDFSDPFQVGAGPDNPDPGFHFPPPLEPHSSSSFRFSDFAAATFDSDEWMDTLMATAAGDSTDTSTIPAAAAAAWHNGNSDFGLYGSSPFTTCPTRLSPTSDLNRVIFSSEPHTAAVTATAAVADTGVSLQQGQLPATWATPPPLPPPTAVKEPPKITPSSPPAPPQAPATVQGGLPSLPEPDSSHPLLKALTECALFSETEPDQASESLSQLRKSVSQNGNPIQRVSFYFAEALNRKLSFQMEKDKNLAMVEAASTATTSEELTVCYKALNDACPYSKFAHLTANQAILEATEGASRIHIVDFGIVQGIQWAALLQAFATRSSGKPDSIRISGIPAMALGTSPSASLSATGNRLSEFAKLLELNFEFRPILTPIHELNESSFCVDPNEVLAVNFMLQLYNLLDETPDAVEAALRLAKSLRPKIVXXXXLVSMKLV 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91078g00001 519 MobiDBLite consensus disorder prediction 222 253 - -
Stsc91078g00001 519 ProSiteProfiles GRAS family profile. 262 519 IPR005202 -
Stsc91078g00001 519 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 205 508 IPR005202 -
Stsc91078g00001 519 MobiDBLite consensus disorder prediction 216 269 - -
Stsc91078g00001 519 MobiDBLite consensus disorder prediction 33 49 - -
Stsc91078g00001 519 MobiDBLite consensus disorder prediction 16 112 - -
Stsc91078g00001 519 Pfam GRAS domain family 272 509 IPR005202 -
Stsc91078g00001 519 MobiDBLite consensus disorder prediction 50 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91078g00001 Stsc-Chr91078 19490 22228 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91078g00001 1 508 GRAS Transcription Factor Family AT5G66770 50.388 4.27e-131 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc91078g00001 GRAS 3.6e-65 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91078g00001 - - adu:107477343 761.14