Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91075g00003 ATGAGCAAGCCAATCCTGGATGCAATTTGTGCCAAACTAAAGTGGAAGATGTATTTACCACGAAGTAAAGTCATGTATCCTGGTGATCTAATAAATATGATGATATTTATTGTTCATGGAAGGGTGGAGATCAAAGACAGCGGTGGAATAAGATTCTATATTTCTCATGGGGATACTTATGGCGAAGAACTGCTTCTATGGTGTCTTCGTAGATCTCTTCGTGGTATTAGCACAGGGGTTGGGGGTAGCAAAGTGAAAACGGTGATGGAGGCAGTGGGGAGGCAGCGGAAGGGCGGCACGGCATCGGAAGGGTGGCAACAGCAGTGGCAAGATGAGAGAGATGGAAATGGGTGGGGTTTATGGACAGAAAAGTGGGAAGAGAGTAAAGTGGCGGTGAGGCTATGCCGATATTAA 414 0.4614 MSKPILDAICAKLKWKMYLPRSKVMYPGDLINMMIFIVHGRVEIKDSGGIRFYISHGDTYGEELLLWCLRRSLRGISTGVGGSKVKTVMEAVGRQRKGGTASEGWQQQWQDERDGNGWGLWTEKWEESKVAVRLCRY 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91075g00003 137 CDD CAP_ED 1 72 IPR000595 -
Stsc91075g00003 137 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 72 - -
Stsc91075g00003 137 ProSiteProfiles cAMP/cGMP binding motif profile. 1 72 IPR000595 -
Stsc91075g00003 137 SUPERFAMILY cAMP-binding domain-like 2 71 IPR018490 -
Stsc91075g00003 137 Gene3D Jelly Rolls 1 93 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91075g00003 Stsc-Chr91075 25962 27247 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91075g00003 1 72 Ion Channels AT3G17700 45.833 1.78e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91075g00003 K05391 - adu:127747687 98.2117