Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91073g00003 ATGGAGGGGGCAAAGGGTGTGGAATTGGGAAAGAGAGGCTCCGAAGAGGACGACATGCAAGAAGAGCTGTTGGAGATGGATGCCGAAACTCAGAGGGCGGTTTCAGGGTCAGGCAGCGGACCTCAGGAGGCTGAAATTGGAGATGAATTTGCGGAACGATACTTGTCGAGTTACCGGGATATTGTTAGGATAGGGTTGGAAGATATCATGAAGATGGAGTGGCACAATATTGATGCTGCATATGAGTTTTATCGATTATATGGCAAGTGCAATGGGTTTGGCGTGCGTAAAGGCGACTCTCGGAAGGACACAAATGGTGAATTGGTTAGCTATAGGTTCTTTTGCAATAGGCAAGGAGTCCGGGAAAGTAAGTACCATGGCTGGGTTGATCGAAAGAGGGCACCTCGGGCTGAGACGAGAACTAACTGTGAGGCAAAGTTATCGATATTTCTCGATAAAGGGGATAATATGTGGAAGGTGAGGAAAGTCGTGTTGCAGCACAACCATGAGTTAACGCCTCTTCGAATGGTTCACATGATTCCTATTCCTCAGGAGATACCGGATGCGGCAAAATCATGTACAGAAGGGATGCACGGCCAGGGTGTTGCAACGTCAAGAATCGTTGGATACATGGCTGGAATGGCCGGCGGATACAGGATGCTAGATTTCTTGAAAAAGGATGCATATAACTTTGTCGACAAGAAATGTCGTGAGAGAATAGTTGACGGAGACGCTAATGCAACTATTGTATACTTGGAGGGAAAGGCGGGGGCAGATCCTATGGTGAGTGCAAGGTATCTCCAAACGGAGTCGGGCATGCTCGGTAACTTGTTTTGGGCTGATGGAGCGAGTAGAGTTGACTATCAGCACTTTGGGGACGTGATTGCGCTTGACTCAACGTATAGGAAGAACAAATATCGGCGACCCCTTGTGATTTTCTCTGGCGTGAACAATCACAAGCAGACGTGTGTGTTTGGATTTGGTTTGTTGGTGGATGAGACAGCTGCTTCGTACAAGTGGTTGCTGGAGCAATTCCTGGAAGTTATGTGTGGCAAGAGGCCATGTGTTTTGGTGACTTATGGAGATAAAGCCATTGGTGAGGCAATAAAGGCCATTATGCCGGAAGTGACACACCGCTTGTGTGCGTGGCACATTGAGAAAAATGTGACCAGCAACATGAAGGATATAGCTGTTCGTGATCTTTTCAAACGCTGGTTGTATGCGGATATGGGAGTAAATAAATTTGAGGAGGAATGGGCAGAGGCGATGAAGGAGTATGGTCTTGGGGACAGCTTTTGGGCTACTCAAATGTATGAGAAGAGGAAAATGTGGTCGAACGCGTACCTGAGGGATAAGTTTTGTGTAGGTTTTAGGACAACTTCTAGGTTTGAAGGAATAAATTCAATTGTGAAGTACATGTCTGCGTTGTCGAGGTACACACTGGTGGAGTTGGTCCAAGGGCTTGATTTATTAGTTCAGGAATACAGAAATACCGAATTACTTGCACAATTCAATTCCATATATGATGTCCCGGTGATGACAACGTGCTTCAGGTCAATAGAAATGGGCGCGGCATTGACTTATACGAGAGAGATTTTCCAAGAGGTTAGAAAGCAAATCGAACTGATGGGGGCTGTGAACTTAATTGCAAAGACGACAGTGTCAACGGTGATGACATACACGATGGAGGAGTACGGGAACCCGGGTGTTAATATTCAAGCAATGTATGAGACAAGCATTGGTCGTGTTGACTGTGAGTGTAACTTTTGGAAGAGGCATGGATTCCCGTGTTGCCATATGTTCTTTGTAATGAAATACGAACACCTTAAGGAGATTCCGGAGGGCCTCATACTTAGGCGGTGGAGGAAAAACGCGAAGGCAATGGGGGAGTACATGGATACCGGTGAGGAGTGCAGTGAGCGTGGGTTTCTGCTGAGGCATGGTGCTTTGCACTCGGCTTCACAGTGGATGTTTATGCTGGGTGCCCAGAGGTATGCGTTGTGCAAGAGATCGATGGATGTCATCAATGGCCTTTGCAAGGAGTTGGAGGAGGAGTTAAGAAGAACTAAGGAGGGGGCCAAATCTACAGGTACCAGGCCAGATTTGGAGGACCCTGAGGTGGTGTCGACCAAAGGAGCACCGCGACAGGGCAAGAAAATGTCAAAGAAGCGTAAGTGTAAGAGGTGCAACCAGTCGGGCCGCAACAAGCAGCAGTGTCCAGAGCCTAGAACTCCTTGGGAGAGGGAAATTAATGCTGAAAGAGTGGGTCGGGGGCAAGATGTTAGAGCCGACGGCAATCTTGGAGCTAAAGTCAGGGAACATCATATACAGGATATGCATGGAGGGGCAATGAACAACTCCGTACATGAGTCTCTAGAGCCGGTGGAGTGA 2391 0.4768 MEGAKGVELGKRGSEEDDMQEELLEMDAETQRAVSGSGSGPQEAEIGDEFAERYLSSYRDIVRIGLEDIMKMEWHNIDAAYEFYRLYGKCNGFGVRKGDSRKDTNGELVSYRFFCNRQGVRESKYHGWVDRKRAPRAETRTNCEAKLSIFLDKGDNMWKVRKVVLQHNHELTPLRMVHMIPIPQEIPDAAKSCTEGMHGQGVATSRIVGYMAGMAGGYRMLDFLKKDAYNFVDKKCRERIVDGDANATIVYLEGKAGADPMVSARYLQTESGMLGNLFWADGASRVDYQHFGDVIALDSTYRKNKYRRPLVIFSGVNNHKQTCVFGFGLLVDETAASYKWLLEQFLEVMCGKRPCVLVTYGDKAIGEAIKAIMPEVTHRLCAWHIEKNVTSNMKDIAVRDLFKRWLYADMGVNKFEEEWAEAMKEYGLGDSFWATQMYEKRKMWSNAYLRDKFCVGFRTTSRFEGINSIVKYMSALSRYTLVELVQGLDLLVQEYRNTELLAQFNSIYDVPVMTTCFRSIEMGAALTYTREIFQEVRKQIELMGAVNLIAKTTVSTVMTYTMEEYGNPGVNIQAMYETSIGRVDCECNFWKRHGFPCCHMFFVMKYEHLKEIPEGLILRRWRKNAKAMGEYMDTGEECSERGFLLRHGALHSASQWMFMLGAQRYALCKRSMDVINGLCKELEEELRRTKEGAKSTGTRPDLEDPEVVSTKGAPRQGKKMSKKRKCKRCNQSGRNKQQCPEPRTPWEREINAERVGRGQDVRADGNLGAKVREHHIQDMHGGAMNNSVHESLEPVE 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91073g00003 796 MobiDBLite consensus disorder prediction 741 766 - -
Stsc91073g00003 796 PANTHER OS01G0519700 PROTEIN 67 763 - -
Stsc91073g00003 796 MobiDBLite consensus disorder prediction 688 766 - -
Stsc91073g00003 796 Pfam MULE transposase domain 294 388 IPR018289 -
Stsc91073g00003 796 MobiDBLite consensus disorder prediction 1 18 - -
Stsc91073g00003 796 MobiDBLite consensus disorder prediction 688 708 - -
Stsc91073g00003 796 Pfam FAR1 DNA-binding domain 82 172 IPR004330 -
Stsc91073g00003 796 ProSiteProfiles Zinc finger SWIM-type profile. 576 608 IPR007527 GO:0008270
Stsc91073g00003 796 MobiDBLite consensus disorder prediction 1 44 - -
Stsc91073g00003 796 MobiDBLite consensus disorder prediction 716 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91073g00003 Stsc-Chr91073 12685 16705 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc91073g00003 MULE 3.2e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91073g00003 - - ahf:112758792 773.467