Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91073g00002 ATGGATGCCGAAACTCAGAGGGCGGTTTCAGGGTCAGGCAGCGGACCTCAGGAGGCTGAAATTGGAGATGAATTTGCGGAACGATACTTGTCGAGTTACCGGGATATTGTTAGGATAGGGTTGGAAGATATCATGAAGATGGAGTGGCACAATATTGATGCTGCATATGAGTTTTATCGATTATATGGCAAGTGCAATGGGTTTGGCGTGCGTAAAGGCGACTCTCGGAAGGACACAAATGGTGAATTGGTTAGCTATAGGTTCTTTTGCAATAGGCAAGGAGTCCGGGAAAGTAAGTACCATGGCTGGGTTGATCGAAAGAGGGCACCTCGGGCTGAGACGAGAACTAACTGTGAGGCAAAGTTATCGATATTTCTCGATAAAGGGGATAATATGTGGAAGGTGAGGAAAGTCGTGTTGCAGCACAACCATGAGTTAACGCCTCTTCGAATGGTTCACATGATTCCTATTCCTCAGGAGATACCGGATGCGGCAAAATCATGTACAGAAGGGATGCACGGCCAGGGTGTTGCAACGTCAAGAATCGTTGGATACATGGCTGGAATGGCCGGCGGATACAGGATGCTAGATTTCTTGAAAAAGGATGCATATAACTTTGTCGACAAGAAATGTCGTGAGAGAATAGTTGACGGAGACGCTAATGCAACTATTGTATACTTGGAGGGAAAGGCGGGGGCAGATCCTATGGTGAGTGCAAGGTATCTCCAAACGGAGTCGGGCATGCTCGGTAACTTGTTTTGGGCTGATGGAGCGAGTAGAGTTGACTATCAGCACTTTGGGGACGTGATTGCGCTTGACTCAACGTATAGGAAGAACAAATATCGGCGACCCCTTGTGATTTTCTCTGGCGTGAACAATCACAAGCAGACGTGTGTGTTTGGATTTGGTTTGTTGGTGGATGAGACAGCTGCTTCGTACAAGTGGTTGCTGGAGCAATTCCTGGAAGTTATGTGTGGCAAGAGGCCATGTGTTTTGGTGACTTATGGAGATAAAGCCATTGGTGAGGCAATAAAGGCCATTATGCCGGAAGTGACACACCGCTTGTGTGCGTGGCACATTGAGAAAAATGTGACCAGCAACATGAAGGATATAGCTGTTCGTGATCTTTTCAAACGCTGGTTGTATGCGGATATGGGAGTAAATAAATTTGAGGAGGAATGGGCAGAGGCGATGAAGGAGTATGGTCTTGGGGACAGCTTTTGGGCTACTCAAATGTATGAGAAGAGGAAAATGTGGTCGAACGCGTACCTGAGGGATAAGTTTTGTGTAGGTTTTAGGACAACTTCTAGGTTTGAAGGAATAAATTCAATTGTGAAGTACATGTCTGCGTTGTCGAGGTACACACTGGTGGAGTTGGTCCAAGGGCTTGATTTATTAGTTCAGGAATACAGAAATACCGAATTACTTGCACAATTCAATTCCATATATGATGTCCCGGTGATGACAACGTGCTTCAGGTCAATAGAAATGGGCGCGGCATTGACTTATACGAGAGAGATTTTCCAAGAGGTTAGAAAGCAAATCGAACTGATGGGGGCTGTGAACTTAATTGCAAAGACGACAGTGTCAACGGTGATGACATACACGATGGAGGAGTACGGGAACCCGGGTGTTAATATTCAAGCAATGTATGAGACAAGCATTGGTCGTGTTGACTGTGAGTGTAACTTTTGGAAGAGGCATGGATTCCCGTGTTGCCATATGTTCTTTGTAATGAAATACGAACACCTTAAGGAGATTCCGGAGGGCCTCATACTTAGGCGGTGGAGGAAAAACGCGAAGGCAATGGGGGAGTACATGGATACCGGTGAGGAGTGCAGTGAGCGTGGGTTTCTGCTGAGGCATGGTGCTTTGCACTCGGCTTCACAGTGGATGTTTATGCTGGGTGCCCAGAGGTATGCGTTGTGCAAGAGATCGATGGATGTCATCAATGGCCTTTGCAAGGAGTTGGAGGAGGAGTTAAGAAGAACTAAGGAGGGGGCCAAATCTACAGGTACCAGGCCAGATTTGGAGGACCCTGAGGTGGTGTCGACCAAAGGAGCACCGCGACAGGGCAAGAAAATGTCAAAGAAGCGTAAGTGTAAGAGGTGCAACCAGTCGGGCCGCAACAAGCAGCAGTGTCCAGAGCCTAGAACTCCTTGGGAGAGGGAAATTAATGCTGAAAGAGTGGGTCGGGGGCAAGATGTTAGAGCCGACGGCAATCTTGGAGCTAAAGTCAGGGAACATCATATACAGGATATGCATGGAGGGGCAATGAACAACTCCGTACATGAGTCTCTAGAGCCGGTGGAGTGA 2316 0.4745 MDAETQRAVSGSGSGPQEAEIGDEFAERYLSSYRDIVRIGLEDIMKMEWHNIDAAYEFYRLYGKCNGFGVRKGDSRKDTNGELVSYRFFCNRQGVRESKYHGWVDRKRAPRAETRTNCEAKLSIFLDKGDNMWKVRKVVLQHNHELTPLRMVHMIPIPQEIPDAAKSCTEGMHGQGVATSRIVGYMAGMAGGYRMLDFLKKDAYNFVDKKCRERIVDGDANATIVYLEGKAGADPMVSARYLQTESGMLGNLFWADGASRVDYQHFGDVIALDSTYRKNKYRRPLVIFSGVNNHKQTCVFGFGLLVDETAASYKWLLEQFLEVMCGKRPCVLVTYGDKAIGEAIKAIMPEVTHRLCAWHIEKNVTSNMKDIAVRDLFKRWLYADMGVNKFEEEWAEAMKEYGLGDSFWATQMYEKRKMWSNAYLRDKFCVGFRTTSRFEGINSIVKYMSALSRYTLVELVQGLDLLVQEYRNTELLAQFNSIYDVPVMTTCFRSIEMGAALTYTREIFQEVRKQIELMGAVNLIAKTTVSTVMTYTMEEYGNPGVNIQAMYETSIGRVDCECNFWKRHGFPCCHMFFVMKYEHLKEIPEGLILRRWRKNAKAMGEYMDTGEECSERGFLLRHGALHSASQWMFMLGAQRYALCKRSMDVINGLCKELEEELRRTKEGAKSTGTRPDLEDPEVVSTKGAPRQGKKMSKKRKCKRCNQSGRNKQQCPEPRTPWEREINAERVGRGQDVRADGNLGAKVREHHIQDMHGGAMNNSVHESLEPVE 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91073g00002 771 MobiDBLite consensus disorder prediction 663 741 - -
Stsc91073g00002 771 PANTHER OS01G0519700 PROTEIN 42 738 - -
Stsc91073g00002 771 MobiDBLite consensus disorder prediction 691 706 - -
Stsc91073g00002 771 Pfam MULE transposase domain 269 363 IPR018289 -
Stsc91073g00002 771 Pfam FAR1 DNA-binding domain 57 147 IPR004330 -
Stsc91073g00002 771 MobiDBLite consensus disorder prediction 716 741 - -
Stsc91073g00002 771 MobiDBLite consensus disorder prediction 663 683 - -
Stsc91073g00002 771 ProSiteProfiles Zinc finger SWIM-type profile. 551 583 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91073g00002 Stsc-Chr91073 11028 16653 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc91073g00002 MULE 3e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91073g00002 - - ahf:112758792 773.467